Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.13■□□□□ 0.49
CTSBP07858 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.13■□□□□ 0.49
CTSBP07858 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.13■□□□□ 0.49
CTSBP07858 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CTSBP07858 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSBP07858 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CTSBP07858 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSBP07858 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTSBP07858 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSBP07858 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CTSBP07858 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTSBP07858 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.12■□□□□ 0.49
CTSBP07858 SLC25A24-204ENST00000569674 2357 ntBASIC18.12■□□□□ 0.49
CTSBP07858 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTSBP07858 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTSBP07858 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSBP07858 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSBP07858 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSBP07858 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.12■□□□□ 0.49
CTSBP07858 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CTSBP07858 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.12■□□□□ 0.49
CTSBP07858 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CTSBP07858 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
CTSBP07858 AL032819.2-201ENST00000624543 2162 ntBASIC18.12■□□□□ 0.49
CTSBP07858 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSBP07858 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSBP07858 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.12■□□□□ 0.49
CTSBP07858 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.12■□□□□ 0.49
CTSBP07858 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSBP07858 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSBP07858 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.11■□□□□ 0.49
CTSBP07858 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CTSBP07858 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTSBP07858 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.11■□□□□ 0.49
CTSBP07858 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.11■□□□□ 0.49
CTSBP07858 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.11■□□□□ 0.49
CTSBP07858 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.11■□□□□ 0.49
CTSBP07858 HMGA1P5-201ENST00000412453 271 ntBASIC18.11■□□□□ 0.49
CTSBP07858 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.11■□□□□ 0.49
CTSBP07858 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
CTSBP07858 TSPY21P-201ENST00000433481 731 ntBASIC18.11■□□□□ 0.49
CTSBP07858 TSPY17P-201ENST00000450329 467 ntBASIC18.11■□□□□ 0.49
CTSBP07858 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.11■□□□□ 0.49
CTSBP07858 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.11■□□□□ 0.49
CTSBP07858 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTSBP07858 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTSBP07858 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTSBP07858 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.11■□□□□ 0.49
CTSBP07858 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.11■□□□□ 0.49
CTSBP07858 AL138966.2-201ENST00000621997 464 ntBASIC18.11■□□□□ 0.49
CTSBP07858 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSBP07858 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CTSBP07858 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTSBP07858 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSBP07858 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSBP07858 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSBP07858 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.11■□□□□ 0.49
CTSBP07858 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSBP07858 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSBP07858 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.11■□□□□ 0.49
CTSBP07858 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSBP07858 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CTSBP07858 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CTSBP07858 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTSBP07858 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSBP07858 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTSBP07858 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.1■□□□□ 0.49
CTSBP07858 KRT8P45-201ENST00000414328 1447 ntBASIC18.1■□□□□ 0.49
CTSBP07858 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CTSBP07858 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CTSBP07858 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTSBP07858 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CTSBP07858 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.1■□□□□ 0.49
CTSBP07858 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTSBP07858 CA15P1-201ENST00000481698 905 ntBASIC18.1■□□□□ 0.49
CTSBP07858 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
CTSBP07858 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.1■□□□□ 0.49
CTSBP07858 AC116562.4-201ENST00000641316 2276 ntBASIC18.1■□□□□ 0.49
CTSBP07858 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CTSBP07858 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSBP07858 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSBP07858 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSBP07858 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTSBP07858 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.09■□□□□ 0.49
CTSBP07858 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSBP07858 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTSBP07858 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
CTSBP07858 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSBP07858 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTSBP07858 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.09■□□□□ 0.49
CTSBP07858 LIN28AP1-201ENST00000429574 405 ntBASIC18.09■□□□□ 0.49
CTSBP07858 ATP5G1P1-201ENST00000448724 379 ntBASIC18.09■□□□□ 0.49
CTSBP07858 AC010653.2-201ENST00000623505 997 ntBASIC18.09■□□□□ 0.49
CTSBP07858 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CTSBP07858 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSBP07858 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSBP07858 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSBP07858 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.09■□□□□ 0.49
CTSBP07858 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSBP07858 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms