Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.88■□□□□ 0.13
CTSDP07339 CYP2T1P-201ENST00000432607 1285 ntBASIC15.88■□□□□ 0.13
CTSDP07339 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.88■□□□□ 0.13
CTSDP07339 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.88■□□□□ 0.13
CTSDP07339 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.88■□□□□ 0.13
CTSDP07339 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CTSDP07339 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CTSDP07339 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.88■□□□□ 0.13
CTSDP07339 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.88■□□□□ 0.13
CTSDP07339 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.88■□□□□ 0.13
CTSDP07339 AP000997.3-201ENST00000623333 2250 ntBASIC15.88■□□□□ 0.13
CTSDP07339 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.88■□□□□ 0.13
CTSDP07339 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.88■□□□□ 0.13
CTSDP07339 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CTSDP07339 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.87■□□□□ 0.13
CTSDP07339 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.87■□□□□ 0.13
CTSDP07339 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
CTSDP07339 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
CTSDP07339 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.87■□□□□ 0.13
CTSDP07339 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CTSDP07339 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CTSDP07339 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.87■□□□□ 0.13
CTSDP07339 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 LTB4R2-202ENST00000528054 3092 ntBASIC15.87■□□□□ 0.13
CTSDP07339 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CTSDP07339 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CTSDP07339 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.87■□□□□ 0.13
CTSDP07339 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.86■□□□□ 0.13
CTSDP07339 AC010980.2-201ENST00000587099 1412 ntBASIC15.86■□□□□ 0.13
CTSDP07339 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.86■□□□□ 0.13
CTSDP07339 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.86■□□□□ 0.13
CTSDP07339 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CTSDP07339 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.86■□□□□ 0.13
CTSDP07339 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 MKRN4P-201ENST00000444706 1521 ntBASIC15.86■□□□□ 0.13
CTSDP07339 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CTSDP07339 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.86■□□□□ 0.13
CTSDP07339 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 KRT18P5-201ENST00000436075 1291 ntBASIC15.86■□□□□ 0.13
CTSDP07339 DUX4L16-201ENST00000555130 1264 ntBASIC15.86■□□□□ 0.13
CTSDP07339 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.86■□□□□ 0.13
CTSDP07339 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CTSDP07339 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.86■□□□□ 0.13
CTSDP07339 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CTSDP07339 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CTSDP07339 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CTSDP07339 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CTSDP07339 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.85■□□□□ 0.13
CTSDP07339 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.85■□□□□ 0.13
CTSDP07339 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CTSDP07339 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.85■□□□□ 0.13
CTSDP07339 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CTSDP07339 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CTSDP07339 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTSDP07339 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.85■□□□□ 0.13
CTSDP07339 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms