Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
OPN1SWP03999 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 AL031598.1-201ENST00000561511 1773 ntBASIC17.86■□□□□ 0.45
OPN1SWP03999 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
OPN1SWP03999 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.86■□□□□ 0.45
OPN1SWP03999 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.86■□□□□ 0.45
OPN1SWP03999 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.86■□□□□ 0.45
OPN1SWP03999 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.86■□□□□ 0.45
OPN1SWP03999 MIR4758-201ENST00000577688 71 ntBASIC17.86■□□□□ 0.45
OPN1SWP03999 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.86■□□□□ 0.45
OPN1SWP03999 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
OPN1SWP03999 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.86■□□□□ 0.45
OPN1SWP03999 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
OPN1SWP03999 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
OPN1SWP03999 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.86■□□□□ 0.45
OPN1SWP03999 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OPN1SWP03999 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
OPN1SWP03999 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.85■□□□□ 0.45
OPN1SWP03999 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPN1SWP03999 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPN1SWP03999 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPN1SWP03999 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPN1SWP03999 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPN1SWP03999 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
OPN1SWP03999 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.85■□□□□ 0.45
OPN1SWP03999 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
OPN1SWP03999 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPN1SWP03999 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPN1SWP03999 NCF1B-203ENST00000435988 1254 ntBASIC17.85■□□□□ 0.45
OPN1SWP03999 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.85■□□□□ 0.45
OPN1SWP03999 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.85■□□□□ 0.45
OPN1SWP03999 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.85■□□□□ 0.45
OPN1SWP03999 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.85■□□□□ 0.45
OPN1SWP03999 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.85■□□□□ 0.45
OPN1SWP03999 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.85■□□□□ 0.45
OPN1SWP03999 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPN1SWP03999 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPN1SWP03999 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
OPN1SWP03999 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.85■□□□□ 0.45
OPN1SWP03999 AC060766.5-201ENST00000590539 871 ntBASIC17.85■□□□□ 0.45
OPN1SWP03999 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.85■□□□□ 0.45
OPN1SWP03999 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OPN1SWP03999 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
OPN1SWP03999 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.84■□□□□ 0.45
OPN1SWP03999 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
OPN1SWP03999 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
OPN1SWP03999 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.84■□□□□ 0.45
OPN1SWP03999 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.84■□□□□ 0.45
OPN1SWP03999 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
OPN1SWP03999 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.84■□□□□ 0.45
OPN1SWP03999 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.84■□□□□ 0.45
OPN1SWP03999 KRT18P16-201ENST00000510337 1294 ntBASIC17.84■□□□□ 0.45
OPN1SWP03999 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.84■□□□□ 0.45
OPN1SWP03999 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.84■□□□□ 0.45
OPN1SWP03999 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 SOX15-203ENST00000570788 1093 ntBASIC17.84■□□□□ 0.45
OPN1SWP03999 AC083880.1-201ENST00000608266 535 ntBASIC17.84■□□□□ 0.45
OPN1SWP03999 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.84■□□□□ 0.45
OPN1SWP03999 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
OPN1SWP03999 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.84■□□□□ 0.45
OPN1SWP03999 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
OPN1SWP03999 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 AC018470.1-201ENST00000624790 3129 ntBASIC17.84■□□□□ 0.45
OPN1SWP03999 AL512353.2-201ENST00000448759 1962 ntBASIC17.84■□□□□ 0.45
OPN1SWP03999 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
OPN1SWP03999 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.84■□□□□ 0.45
OPN1SWP03999 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
OPN1SWP03999 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
OPN1SWP03999 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
OPN1SWP03999 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms