Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.07■■□□□ 1.28
COL1A1P02452 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A1P02452 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.07■■□□□ 1.28
COL1A1P02452 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A1P02452 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A1P02452 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
COL1A1P02452 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
COL1A1P02452 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A1P02452 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A1P02452 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A1P02452 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
COL1A1P02452 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC23.06■■□□□ 1.28
COL1A1P02452 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
COL1A1P02452 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.06■■□□□ 1.28
COL1A1P02452 AL158211.5-201ENST00000623583 2518 ntBASIC23.06■■□□□ 1.28
COL1A1P02452 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A1P02452 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A1P02452 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A1P02452 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.06■■□□□ 1.28
COL1A1P02452 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
COL1A1P02452 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.05■■□□□ 1.28
COL1A1P02452 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
COL1A1P02452 AP000523.1-201ENST00000398242 1049 ntBASIC23.05■■□□□ 1.28
COL1A1P02452 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
COL1A1P02452 SPDYE15P-201ENST00000424157 909 ntBASIC23.05■■□□□ 1.28
COL1A1P02452 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC23.05■■□□□ 1.28
COL1A1P02452 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A1P02452 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.05■■□□□ 1.28
COL1A1P02452 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A1P02452 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
COL1A1P02452 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A1P02452 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A1P02452 AC036111.1-201ENST00000533973 1582 ntBASIC23.05■■□□□ 1.28
COL1A1P02452 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.05■■□□□ 1.28
COL1A1P02452 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A1P02452 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
COL1A1P02452 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A1P02452 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.05■■□□□ 1.28
COL1A1P02452 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC23.05■■□□□ 1.28
COL1A1P02452 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
COL1A1P02452 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC23.05■■□□□ 1.28
COL1A1P02452 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.05■■□□□ 1.28
COL1A1P02452 AC083849.1-201ENST00000615227 514 ntBASIC23.05■■□□□ 1.28
COL1A1P02452 AC093458.2-201ENST00000623150 629 ntBASIC23.05■■□□□ 1.28
COL1A1P02452 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
COL1A1P02452 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
COL1A1P02452 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.04■■□□□ 1.28
COL1A1P02452 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL1A1P02452 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.04■■□□□ 1.28
COL1A1P02452 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL1A1P02452 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.04■■□□□ 1.28
COL1A1P02452 POLI-202ENST00000406285 2030 ntTSL 2 BASIC23.04■■□□□ 1.28
COL1A1P02452 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.04■■□□□ 1.28
COL1A1P02452 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.04■■□□□ 1.28
COL1A1P02452 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC23.04■■□□□ 1.28
COL1A1P02452 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
COL1A1P02452 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.04■■□□□ 1.28
COL1A1P02452 AL450487.1-201ENST00000426799 995 ntBASIC23.04■■□□□ 1.28
COL1A1P02452 HCG4P8-203ENST00000443049 980 ntBASIC23.04■■□□□ 1.28
COL1A1P02452 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
COL1A1P02452 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC23.04■■□□□ 1.28
COL1A1P02452 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.04■■□□□ 1.28
COL1A1P02452 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.04■■□□□ 1.28
COL1A1P02452 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.04■■□□□ 1.28
COL1A1P02452 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
COL1A1P02452 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
COL1A1P02452 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
COL1A1P02452 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.03■■□□□ 1.28
COL1A1P02452 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
COL1A1P02452 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC23.03■■□□□ 1.28
COL1A1P02452 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
COL1A1P02452 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.03■■□□□ 1.28
COL1A1P02452 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.03■■□□□ 1.28
COL1A1P02452 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC23.03■■□□□ 1.28
COL1A1P02452 PHB2-202ENST00000440277 996 ntTSL 5 BASIC23.03■■□□□ 1.28
COL1A1P02452 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC23.03■■□□□ 1.28
COL1A1P02452 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC23.03■■□□□ 1.28
COL1A1P02452 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
COL1A1P02452 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
COL1A1P02452 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
COL1A1P02452 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL1A1P02452 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
COL1A1P02452 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
COL1A1P02452 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms