Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 NBPF21P-201ENST00000425093 1451 ntBASIC17.23■□□□□ 0.35
PTP4A3O75365 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PTP4A3O75365 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PTP4A3O75365 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.23■□□□□ 0.35
PTP4A3O75365 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PTP4A3O75365 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.23■□□□□ 0.35
PTP4A3O75365 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
PTP4A3O75365 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.23■□□□□ 0.35
PTP4A3O75365 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PTP4A3O75365 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.22■□□□□ 0.35
PTP4A3O75365 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PTP4A3O75365 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 TSPY21P-201ENST00000433481 731 ntBASIC17.22■□□□□ 0.35
PTP4A3O75365 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.22■□□□□ 0.35
PTP4A3O75365 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.22■□□□□ 0.35
PTP4A3O75365 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.22■□□□□ 0.35
PTP4A3O75365 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
PTP4A3O75365 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.22■□□□□ 0.35
PTP4A3O75365 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.22■□□□□ 0.35
PTP4A3O75365 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.22■□□□□ 0.35
PTP4A3O75365 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.22■□□□□ 0.35
PTP4A3O75365 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.22■□□□□ 0.35
PTP4A3O75365 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PTP4A3O75365 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.21■□□□□ 0.35
PTP4A3O75365 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PTP4A3O75365 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PTP4A3O75365 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.21■□□□□ 0.35
PTP4A3O75365 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.21■□□□□ 0.35
PTP4A3O75365 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.21■□□□□ 0.35
PTP4A3O75365 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.21■□□□□ 0.35
PTP4A3O75365 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 C1QL1P1-201ENST00000568105 661 ntBASIC17.21■□□□□ 0.35
PTP4A3O75365 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.21■□□□□ 0.35
PTP4A3O75365 AC083906.6-201ENST00000641366 219 ntBASIC17.21■□□□□ 0.35
PTP4A3O75365 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
PTP4A3O75365 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PTP4A3O75365 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.21■□□□□ 0.34
PTP4A3O75365 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTP4A3O75365 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.2■□□□□ 0.34
PTP4A3O75365 AC090164.3-201ENST00000610780 2143 ntBASIC17.2■□□□□ 0.34
PTP4A3O75365 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.2■□□□□ 0.34
PTP4A3O75365 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.2■□□□□ 0.34
PTP4A3O75365 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.2■□□□□ 0.34
PTP4A3O75365 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.2■□□□□ 0.34
PTP4A3O75365 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 AC090192.1-201ENST00000517740 490 ntBASIC17.2■□□□□ 0.34
PTP4A3O75365 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.2■□□□□ 0.34
PTP4A3O75365 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.2■□□□□ 0.34
PTP4A3O75365 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.2■□□□□ 0.34
PTP4A3O75365 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTP4A3O75365 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PTP4A3O75365 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
PTP4A3O75365 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.2■□□□□ 0.34
PTP4A3O75365 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTP4A3O75365 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
PTP4A3O75365 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTP4A3O75365 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PTP4A3O75365 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.19■□□□□ 0.34
PTP4A3O75365 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms