Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE3O75131 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE3O75131 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
CPNE3O75131 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE3O75131 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE3O75131 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE3O75131 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.32■□□□□ 0.52
CPNE3O75131 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE3O75131 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE3O75131 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE3O75131 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.32■□□□□ 0.52
CPNE3O75131 CCR12P-201ENST00000446203 998 ntBASIC18.32■□□□□ 0.52
CPNE3O75131 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE3O75131 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE3O75131 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.32■□□□□ 0.52
CPNE3O75131 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CPNE3O75131 AC116562.4-202ENST00000641738 218 ntBASIC18.32■□□□□ 0.52
CPNE3O75131 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE3O75131 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CPNE3O75131 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE3O75131 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE3O75131 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE3O75131 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE3O75131 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE3O75131 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE3O75131 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
CPNE3O75131 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CPNE3O75131 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CPNE3O75131 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE3O75131 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPNE3O75131 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 SLC25A1P2-201ENST00000430693 912 ntBASIC18.31■□□□□ 0.52
CPNE3O75131 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE3O75131 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.31■□□□□ 0.52
CPNE3O75131 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.31■□□□□ 0.52
CPNE3O75131 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.31■□□□□ 0.52
CPNE3O75131 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.31■□□□□ 0.52
CPNE3O75131 AL445228.2-201ENST00000605589 952 ntBASIC18.31■□□□□ 0.52
CPNE3O75131 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CPNE3O75131 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CPNE3O75131 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE3O75131 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CPNE3O75131 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE3O75131 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE3O75131 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE3O75131 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE3O75131 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE3O75131 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE3O75131 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE3O75131 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE3O75131 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.3■□□□□ 0.52
CPNE3O75131 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE3O75131 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE3O75131 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CPNE3O75131 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE3O75131 AC010203.1-204ENST00000548782 407 ntBASIC18.3■□□□□ 0.52
CPNE3O75131 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE3O75131 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
CPNE3O75131 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE3O75131 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE3O75131 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE3O75131 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE3O75131 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE3O75131 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CPNE3O75131 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE3O75131 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE3O75131 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE3O75131 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE3O75131 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.29■□□□□ 0.52
CPNE3O75131 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.29■□□□□ 0.52
CPNE3O75131 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
CPNE3O75131 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CPNE3O75131 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE3O75131 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.29■□□□□ 0.52
CPNE3O75131 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE3O75131 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.29■□□□□ 0.52
CPNE3O75131 KRT18P35-201ENST00000510488 1269 ntBASIC18.29■□□□□ 0.52
CPNE3O75131 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CPNE3O75131 FAM87A-204ENST00000613235 858 ntBASIC18.29■□□□□ 0.52
CPNE3O75131 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE3O75131 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
CPNE3O75131 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE3O75131 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CPNE3O75131 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CPNE3O75131 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.29■□□□□ 0.52
CPNE3O75131 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms