Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
FOXD2O60548 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXD2O60548 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.22■□□□□ 0.67
FOXD2O60548 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
FOXD2O60548 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
FOXD2O60548 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
FOXD2O60548 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
FOXD2O60548 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXD2O60548 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
FOXD2O60548 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.21■□□□□ 0.67
FOXD2O60548 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXD2O60548 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 FDX1P1-201ENST00000449115 551 ntBASIC19.21■□□□□ 0.67
FOXD2O60548 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXD2O60548 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXD2O60548 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXD2O60548 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
FOXD2O60548 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
FOXD2O60548 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXD2O60548 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
FOXD2O60548 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXD2O60548 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.21■□□□□ 0.67
FOXD2O60548 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXD2O60548 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
FOXD2O60548 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.21■□□□□ 0.67
FOXD2O60548 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXD2O60548 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.2■□□□□ 0.66
FOXD2O60548 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXD2O60548 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXD2O60548 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXD2O60548 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXD2O60548 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXD2O60548 AC116351.2-201ENST00000606540 1585 ntBASIC19.2■□□□□ 0.66
FOXD2O60548 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXD2O60548 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
FOXD2O60548 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
FOXD2O60548 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXD2O60548 KRT17P6-201ENST00000453795 1220 ntBASIC19.2■□□□□ 0.66
FOXD2O60548 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.2■□□□□ 0.66
FOXD2O60548 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.2■□□□□ 0.66
FOXD2O60548 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXD2O60548 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXD2O60548 AL441883.1-201ENST00000566170 1045 ntBASIC19.2■□□□□ 0.66
FOXD2O60548 MIR3652-201ENST00000579335 131 ntBASIC19.2■□□□□ 0.66
FOXD2O60548 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.2■□□□□ 0.66
FOXD2O60548 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.2■□□□□ 0.66
FOXD2O60548 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXD2O60548 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXD2O60548 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
FOXD2O60548 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXD2O60548 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXD2O60548 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXD2O60548 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXD2O60548 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXD2O60548 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXD2O60548 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
FOXD2O60548 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXD2O60548 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FOXD2O60548 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXD2O60548 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.19■□□□□ 0.66
FOXD2O60548 PRELID1P1-202ENST00000567272 903 ntBASIC19.19■□□□□ 0.66
FOXD2O60548 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.19■□□□□ 0.66
FOXD2O60548 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
FOXD2O60548 CR769767.2-201ENST00000622735 460 ntBASIC19.19■□□□□ 0.66
FOXD2O60548 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
FOXD2O60548 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FOXD2O60548 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXD2O60548 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXD2O60548 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms