Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBFD1O14562 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.57■□□□□ 0.56
UBFD1O14562 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBFD1O14562 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.57■□□□□ 0.56
UBFD1O14562 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBFD1O14562 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBFD1O14562 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBFD1O14562 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBFD1O14562 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.57■□□□□ 0.56
UBFD1O14562 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBFD1O14562 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBFD1O14562 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBFD1O14562 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBFD1O14562 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBFD1O14562 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UBFD1O14562 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.56■□□□□ 0.56
UBFD1O14562 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.56■□□□□ 0.56
UBFD1O14562 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.56■□□□□ 0.56
UBFD1O14562 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.56■□□□□ 0.56
UBFD1O14562 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.56■□□□□ 0.56
UBFD1O14562 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.56■□□□□ 0.56
UBFD1O14562 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
UBFD1O14562 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.56■□□□□ 0.56
UBFD1O14562 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.56■□□□□ 0.56
UBFD1O14562 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UBFD1O14562 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
UBFD1O14562 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.56■□□□□ 0.56
UBFD1O14562 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBFD1O14562 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.55■□□□□ 0.56
UBFD1O14562 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
UBFD1O14562 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBFD1O14562 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.55■□□□□ 0.56
UBFD1O14562 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBFD1O14562 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.55■□□□□ 0.56
UBFD1O14562 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UBFD1O14562 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UBFD1O14562 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBFD1O14562 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBFD1O14562 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
UBFD1O14562 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.55■□□□□ 0.56
UBFD1O14562 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
UBFD1O14562 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.55■□□□□ 0.56
UBFD1O14562 POM121L13P-201ENST00000422362 380 ntBASIC18.55■□□□□ 0.56
UBFD1O14562 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.55■□□□□ 0.56
UBFD1O14562 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.55■□□□□ 0.56
UBFD1O14562 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.55■□□□□ 0.56
UBFD1O14562 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBFD1O14562 AC008403.3-201ENST00000598924 454 ntBASIC18.55■□□□□ 0.56
UBFD1O14562 HLA-A-209ENST00000638375 975 ntBASIC18.55■□□□□ 0.56
UBFD1O14562 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
UBFD1O14562 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBFD1O14562 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.55■□□□□ 0.56
UBFD1O14562 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
UBFD1O14562 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBFD1O14562 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.55■□□□□ 0.56
UBFD1O14562 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
UBFD1O14562 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.54■□□□□ 0.56
UBFD1O14562 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.54■□□□□ 0.56
UBFD1O14562 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.54■□□□□ 0.56
UBFD1O14562 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
UBFD1O14562 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.54■□□□□ 0.56
UBFD1O14562 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
UBFD1O14562 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.54■□□□□ 0.56
UBFD1O14562 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.54■□□□□ 0.56
UBFD1O14562 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.54■□□□□ 0.56
UBFD1O14562 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 ANO7L1-203ENST00000602586 1720 ntBASIC18.54■□□□□ 0.56
UBFD1O14562 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
UBFD1O14562 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms