Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
UPK2O00526 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK2O00526 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
UPK2O00526 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
UPK2O00526 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.34■□□□□ 0.05
UPK2O00526 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.34■□□□□ 0.05
UPK2O00526 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK2O00526 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.34■□□□□ 0.05
UPK2O00526 UNC93B5-201ENST00000530315 699 ntBASIC15.34■□□□□ 0.05
UPK2O00526 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.34■□□□□ 0.05
UPK2O00526 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.34■□□□□ 0.05
UPK2O00526 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK2O00526 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.34■□□□□ 0.05
UPK2O00526 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.34■□□□□ 0.05
UPK2O00526 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK2O00526 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK2O00526 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
UPK2O00526 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK2O00526 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
UPK2O00526 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UPK2O00526 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
UPK2O00526 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
UPK2O00526 NBPF21P-201ENST00000425093 1451 ntBASIC15.33■□□□□ 0.05
UPK2O00526 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
UPK2O00526 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
UPK2O00526 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
UPK2O00526 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
UPK2O00526 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
UPK2O00526 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK2O00526 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK2O00526 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK2O00526 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC15.33■□□□□ 0.04
UPK2O00526 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UPK2O00526 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.33■□□□□ 0.04
UPK2O00526 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK2O00526 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.33■□□□□ 0.04
UPK2O00526 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.33■□□□□ 0.04
UPK2O00526 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
UPK2O00526 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
UPK2O00526 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
UPK2O00526 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.33■□□□□ 0.04
UPK2O00526 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK2O00526 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
UPK2O00526 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK2O00526 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK2O00526 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.33■□□□□ 0.04
UPK2O00526 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
UPK2O00526 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.33■□□□□ 0.04
UPK2O00526 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
UPK2O00526 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK2O00526 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UPK2O00526 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.32■□□□□ 0.04
UPK2O00526 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
UPK2O00526 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.32■□□□□ 0.04
UPK2O00526 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 TSPY21P-201ENST00000433481 731 ntBASIC15.32■□□□□ 0.04
UPK2O00526 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.32■□□□□ 0.04
UPK2O00526 AL160286.2-201ENST00000567150 934 ntBASIC15.32■□□□□ 0.04
UPK2O00526 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.32■□□□□ 0.04
UPK2O00526 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.32■□□□□ 0.04
UPK2O00526 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.32■□□□□ 0.04
UPK2O00526 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 AC004264.1-201ENST00000608354 794 ntBASIC15.32■□□□□ 0.04
UPK2O00526 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.32■□□□□ 0.04
UPK2O00526 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
UPK2O00526 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
UPK2O00526 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.32■□□□□ 0.04
UPK2O00526 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.32■□□□□ 0.04
UPK2O00526 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.32■□□□□ 0.04
UPK2O00526 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
UPK2O00526 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
UPK2O00526 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK2O00526 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms