Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.39■□□□□ 0.86
O00370 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
O00370 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.39■□□□□ 0.86
O00370 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
O00370 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
O00370 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
O00370 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
O00370 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
O00370 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
O00370 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
O00370 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
O00370 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
O00370 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
O00370 MESTP1-201ENST00000404287 994 ntBASIC20.39■□□□□ 0.85
O00370 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.39■□□□□ 0.85
O00370 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.39■□□□□ 0.85
O00370 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.39■□□□□ 0.85
O00370 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.39■□□□□ 0.85
O00370 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
O00370 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
O00370 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
O00370 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
O00370 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.38■□□□□ 0.85
O00370 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
O00370 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
O00370 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
O00370 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
O00370 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
O00370 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.38■□□□□ 0.85
O00370 AC011506.1-201ENST00000474329 610 ntBASIC20.38■□□□□ 0.85
O00370 NUDT16P1-203ENST00000513809 620 ntBASIC20.38■□□□□ 0.85
O00370 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.38■□□□□ 0.85
O00370 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
O00370 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.38■□□□□ 0.85
O00370 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
O00370 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
O00370 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
O00370 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
O00370 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
O00370 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.38■□□□□ 0.85
O00370 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
O00370 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.38■□□□□ 0.85
O00370 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
O00370 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
O00370 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.37■□□□□ 0.85
O00370 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
O00370 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
O00370 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.37■□□□□ 0.85
O00370 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
O00370 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.37■□□□□ 0.85
O00370 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
O00370 TSPY7P-201ENST00000431358 1114 ntBASIC20.37■□□□□ 0.85
O00370 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.37■□□□□ 0.85
O00370 AC008040.2-201ENST00000461049 708 ntBASIC20.37■□□□□ 0.85
O00370 B3GAT3P1-201ENST00000471720 806 ntBASIC20.37■□□□□ 0.85
O00370 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.37■□□□□ 0.85
O00370 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
O00370 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.37■□□□□ 0.85
O00370 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.37■□□□□ 0.85
O00370 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.37■□□□□ 0.85
O00370 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
O00370 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
O00370 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
O00370 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.37■□□□□ 0.85
O00370 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
O00370 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.36■□□□□ 0.85
O00370 AC004408.2-201ENST00000623613 2777 ntBASIC20.36■□□□□ 0.85
O00370 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
O00370 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
O00370 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
O00370 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.36■□□□□ 0.85
O00370 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.36■□□□□ 0.85
O00370 AC004951.3-201ENST00000418645 1148 ntBASIC20.36■□□□□ 0.85
O00370 SNORA78-201ENST00000459373 127 ntBASIC20.36■□□□□ 0.85
O00370 AC091390.4-202ENST00000476426 537 ntBASIC20.36■□□□□ 0.85
O00370 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.36■□□□□ 0.85
O00370 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
O00370 AC116562.2-201ENST00000507042 360 ntBASIC20.36■□□□□ 0.85
O00370 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.36■□□□□ 0.85
O00370 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
O00370 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.36■□□□□ 0.85
O00370 AC026471.5-201ENST00000615068 467 ntBASIC20.36■□□□□ 0.85
O00370 MIR6786-201ENST00000616843 113 ntBASIC20.36■□□□□ 0.85
O00370 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
O00370 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
O00370 AC141586.3-201ENST00000562166 1838 ntBASIC20.36■□□□□ 0.85
O00370 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms