Protein–RNA interactions for Protein: I3L3M4

Claudin, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
I3L3M4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
I3L3M4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
I3L3M4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.62□□□□□ -0.23
I3L3M4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
I3L3M4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.61□□□□□ -0.23
I3L3M4 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
I3L3M4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
I3L3M4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
I3L3M4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 AL390719.1-204ENST00000412397 1219 ntBASIC13.61□□□□□ -0.23
I3L3M4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.61□□□□□ -0.23
I3L3M4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.61□□□□□ -0.23
I3L3M4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.61□□□□□ -0.23
I3L3M4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.61□□□□□ -0.23
I3L3M4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
I3L3M4 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
I3L3M4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.61□□□□□ -0.23
I3L3M4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
I3L3M4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.61□□□□□ -0.23
I3L3M4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.6□□□□□ -0.23
I3L3M4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC13.6□□□□□ -0.23
I3L3M4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
I3L3M4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
I3L3M4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.6□□□□□ -0.23
I3L3M4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.6□□□□□ -0.23
I3L3M4 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.6□□□□□ -0.23
I3L3M4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
I3L3M4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.6□□□□□ -0.23
I3L3M4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.6□□□□□ -0.23
I3L3M4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
I3L3M4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.6□□□□□ -0.23
I3L3M4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.6□□□□□ -0.23
I3L3M4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.6□□□□□ -0.23
I3L3M4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
I3L3M4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC13.6□□□□□ -0.23
I3L3M4 AC231657.2-201ENST00000624556 255 ntBASIC13.6□□□□□ -0.23
I3L3M4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.6□□□□□ -0.23
I3L3M4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.6□□□□□ -0.23
I3L3M4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
I3L3M4 AL512353.2-201ENST00000448759 1962 ntBASIC13.6□□□□□ -0.23
I3L3M4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
I3L3M4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
I3L3M4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.59□□□□□ -0.23
I3L3M4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
I3L3M4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.59□□□□□ -0.23
I3L3M4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
I3L3M4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
I3L3M4 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.59□□□□□ -0.23
I3L3M4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.59□□□□□ -0.23
I3L3M4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
I3L3M4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC13.59□□□□□ -0.23
I3L3M4 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
I3L3M4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.59□□□□□ -0.23
I3L3M4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
I3L3M4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
I3L3M4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
I3L3M4 LSM12P1-201ENST00000411836 588 ntBASIC13.59□□□□□ -0.23
I3L3M4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
I3L3M4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
I3L3M4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
I3L3M4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms