Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 RPS2P7-201ENST00000447334 885 ntBASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 DUX4L11-201ENST00000611504 1267 ntBASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 DUX4L12-201ENST00000614593 1267 ntBASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 DUX4L14-201ENST00000621227 1267 ntBASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 EML3-212ENST00000494176 2901 ntTSL 2 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.63□□□□□ -0.71
CHKB-CPT1BH3BT56 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CHKB-CPT1BH3BT56 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 LBX2-AS1-202ENST00000603175 2083 ntBASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC10.61□□□□□ -0.71
CHKB-CPT1BH3BT56 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms