Protein–RNA interactions for Protein: A6NEW6

FAM90A16P, Putative protein FAM90A16P/FAM90A17P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A16PA6NEW6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.1■□□□□ 0.17
FAM90A16PA6NEW6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
FAM90A16PA6NEW6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 UNC93B5-201ENST00000530315 699 ntBASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
FAM90A16PA6NEW6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.08■□□□□ 0.17
FAM90A16PA6NEW6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FAM90A16PA6NEW6 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FAM90A16PA6NEW6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
FAM90A16PA6NEW6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
FAM90A16PA6NEW6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
FAM90A16PA6NEW6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FAM90A16PA6NEW6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
FAM90A16PA6NEW6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 WIZP1-201ENST00000531444 2299 ntBASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 NBPF21P-201ENST00000425093 1451 ntBASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
FAM90A16PA6NEW6 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 RNA5SP413-201ENST00000516373 109 ntBASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 CD99P1-205ENST00000527459 561 ntBASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 HLA-A-209ENST00000638375 975 ntBASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
FAM90A16PA6NEW6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms