Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.09■□□□□ 0.97
TRIM49BA6NDI0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 AC239809.2-201ENST00000415381 517 ntBASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 MIR4651-201ENST00000582622 73 ntBASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC21.08■□□□□ 0.97
TRIM49BA6NDI0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM49BA6NDI0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.08■□□□□ 0.96
TRIM49BA6NDI0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRIM49BA6NDI0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
TRIM49BA6NDI0 AL031598.1-201ENST00000561511 1773 ntBASIC21.08■□□□□ 0.96
TRIM49BA6NDI0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRIM49BA6NDI0 AL512353.2-201ENST00000448759 1962 ntBASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 TSPY23P-201ENST00000440136 739 ntBASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 AC124016.1-201ENST00000609552 612 ntBASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 AC073648.6-201ENST00000641589 218 ntBASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRIM49BA6NDI0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 AC009113.1-201ENST00000570267 2443 ntBASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
TRIM49BA6NDI0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms