Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 RARRES2P10-201ENST00000564312 460 ntBASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 TNXA-203ENST00000507684 2038 ntBASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 AL353807.1-201ENST00000427475 662 ntBASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 AC004980.1-204ENST00000429707 299 ntBASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 KSR1P1-201ENST00000446298 240 ntBASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 AF186192.3-201ENST00000583427 947 ntBASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 AC131212.4-201ENST00000623606 975 ntBASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 FP475955.4-201ENST00000623131 1990 ntBASIC19.12■□□□□ 0.65
CCDC162PA2VCL2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 AIRN-201ENST00000601203 4374 ntBASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC162PA2VCL2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 TSPY23P-201ENST00000440136 739 ntBASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC162PA2VCL2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms