Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 MKRN4P-201ENST00000444706 1521 ntBASIC16.67■□□□□ 0.26
SHISA3A0PJX4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 AL589743.5-201ENST00000616611 1050 ntBASIC16.67■□□□□ 0.26
SHISA3A0PJX4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SHISA3A0PJX4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 ZNRF2P3-201ENST00000424200 374 ntBASIC16.66■□□□□ 0.26
SHISA3A0PJX4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 DUX4L16-201ENST00000555130 1264 ntBASIC16.66■□□□□ 0.26
SHISA3A0PJX4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 AC099398.1-201ENST00000567919 2776 ntBASIC16.66■□□□□ 0.26
SHISA3A0PJX4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHISA3A0PJX4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 CYP2T1P-201ENST00000432607 1285 ntBASIC16.65■□□□□ 0.26
SHISA3A0PJX4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 LINC00896-202ENST00000609602 2128 ntBASIC16.65■□□□□ 0.26
SHISA3A0PJX4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHISA3A0PJX4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SHISA3A0PJX4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.64■□□□□ 0.25
SHISA3A0PJX4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms