Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 CDV3P1-201ENST00000471403 739 ntBASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 CPT2-209ENST00000636935 803 ntTSL 5 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 KRT87P-202ENST00000534226 1464 ntBASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TRAV13-2A0A0B4J235 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 PHGDH-210ENST00000641115 1638 ntBASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 SIRPAP1-201ENST00000448467 1770 ntBASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 GRAMD4P7-201ENST00000578182 1232 ntBASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TRAV13-2A0A0B4J235 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 AL162741.1-201ENST00000565563 1558 ntBASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 AC091799.1-201ENST00000422823 811 ntBASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 AL512631.2-201ENST00000604634 923 ntBASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 AC067852.2-201ENST00000590513 2313 ntBASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
TRAV13-2A0A0B4J235 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms