Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 AL441883.1-201ENST00000566170 1045 ntBASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV19A0A0A6YYK7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 AC009947.2-201ENST00000444014 672 ntBASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAV19A0A0A6YYK7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRAV19A0A0A6YYK7 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 AL031133.1-201ENST00000406807 723 ntBASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 NEK4P2-201ENST00000580004 1012 ntBASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 MIR4674-201ENST00000582457 87 ntBASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRAV19A0A0A6YYK7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 AL359075.1-203ENST00000462729 1002 ntBASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 AC091076.1-201ENST00000610741 619 ntBASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRAV19A0A0A6YYK7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms