Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB1Q9Y5G3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB1Q9Y5G3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB1Q9Y5G3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHGB1Q9Y5G3 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHGB1Q9Y5G3 AC020928.2-201ENST00000588717 2197 ntBASIC23.15■■□□□ 1.3
PCDHGB1Q9Y5G3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGB1Q9Y5G3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDHGB1Q9Y5G3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHGB1Q9Y5G3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.14■■□□□ 1.3
PCDHGB1Q9Y5G3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGB1Q9Y5G3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGB1Q9Y5G3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHGB1Q9Y5G3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGB1Q9Y5G3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGB1Q9Y5G3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PCDHGB1Q9Y5G3 RARRES2P7-201ENST00000567349 469 ntBASIC23.12■■□□□ 1.29
PCDHGB1Q9Y5G3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
PCDHGB1Q9Y5G3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
PCDHGB1Q9Y5G3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGB1Q9Y5G3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDHGB1Q9Y5G3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHGB1Q9Y5G3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHGB1Q9Y5G3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
PCDHGB1Q9Y5G3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHGB1Q9Y5G3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB1Q9Y5G3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB1Q9Y5G3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB1Q9Y5G3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB1Q9Y5G3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDHGB1Q9Y5G3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
PCDHGB1Q9Y5G3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHGB1Q9Y5G3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB1Q9Y5G3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB1Q9Y5G3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHGB1Q9Y5G3 AC145676.1-201ENST00000514988 2004 ntBASIC23.08■■□□□ 1.28
PCDHGB1Q9Y5G3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHGB1Q9Y5G3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
PCDHGB1Q9Y5G3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHGB1Q9Y5G3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGB1Q9Y5G3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGB1Q9Y5G3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PCDHGB1Q9Y5G3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHGB1Q9Y5G3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB1Q9Y5G3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB1Q9Y5G3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHGB1Q9Y5G3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PCDHGB1Q9Y5G3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHGB1Q9Y5G3 AC093323.1-202ENST00000635031 2045 ntBASIC23.04■■□□□ 1.28
PCDHGB1Q9Y5G3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGB1Q9Y5G3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGB1Q9Y5G3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGB1Q9Y5G3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGB1Q9Y5G3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHGB1Q9Y5G3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGB1Q9Y5G3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHGB1Q9Y5G3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHGB1Q9Y5G3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHGB1Q9Y5G3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHGB1Q9Y5G3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGB1Q9Y5G3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGB1Q9Y5G3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGB1Q9Y5G3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
PCDHGB1Q9Y5G3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHGB1Q9Y5G3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
PCDHGB1Q9Y5G3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23■■□□□ 1.27
PCDHGB1Q9Y5G3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB1Q9Y5G3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB1Q9Y5G3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB1Q9Y5G3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB1Q9Y5G3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB1Q9Y5G3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23■■□□□ 1.27
PCDHGB1Q9Y5G3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHGB1Q9Y5G3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGB1Q9Y5G3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.98■■□□□ 1.27
PCDHGB1Q9Y5G3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHGB1Q9Y5G3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGB1Q9Y5G3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHGB1Q9Y5G3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PCDHGB1Q9Y5G3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGB1Q9Y5G3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGB1Q9Y5G3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGB1Q9Y5G3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGB1Q9Y5G3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PCDHGB1Q9Y5G3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHGB1Q9Y5G3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
PCDHGB1Q9Y5G3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGB1Q9Y5G3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGB1Q9Y5G3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PCDHGB1Q9Y5G3 AC097358.2-201ENST00000607541 1159 ntBASIC22.95■■□□□ 1.26
PCDHGB1Q9Y5G3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PCDHGB1Q9Y5G3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.94■■□□□ 1.26
PCDHGB1Q9Y5G3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGB1Q9Y5G3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDHGB1Q9Y5G3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDHGB1Q9Y5G3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGB1Q9Y5G3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGB1Q9Y5G3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
PCDHGB1Q9Y5G3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGB1Q9Y5G3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms