Protein–RNA interactions for Protein: Q9Y2V3

RAX, Retinal homeobox protein Rx, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAXQ9Y2V3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
RAXQ9Y2V3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RAXQ9Y2V3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RAXQ9Y2V3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
RAXQ9Y2V3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
RAXQ9Y2V3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.13■■□□□ 1.45
RAXQ9Y2V3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RAXQ9Y2V3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RAXQ9Y2V3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RAXQ9Y2V3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RAXQ9Y2V3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RAXQ9Y2V3 AC010864.1-201ENST00000609407 1511 ntBASIC24.11■■□□□ 1.45
RAXQ9Y2V3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RAXQ9Y2V3 THA1P-201ENST00000590384 1145 ntBASIC24.11■■□□□ 1.45
RAXQ9Y2V3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RAXQ9Y2V3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RAXQ9Y2V3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RAXQ9Y2V3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RAXQ9Y2V3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RAXQ9Y2V3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC24.1■■□□□ 1.45
RAXQ9Y2V3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RAXQ9Y2V3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RAXQ9Y2V3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RAXQ9Y2V3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RAXQ9Y2V3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.09■■□□□ 1.45
RAXQ9Y2V3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.09■■□□□ 1.45
RAXQ9Y2V3 AC133552.2-201ENST00000619106 1032 ntBASIC24.09■■□□□ 1.45
RAXQ9Y2V3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.09■■□□□ 1.45
RAXQ9Y2V3 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RAXQ9Y2V3 AC135983.2-203ENST00000454486 1613 ntBASIC24.09■■□□□ 1.45
RAXQ9Y2V3 AC120057.4-201ENST00000624722 1615 ntBASIC24.09■■□□□ 1.45
RAXQ9Y2V3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RAXQ9Y2V3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.09■■□□□ 1.45
RAXQ9Y2V3 AC009299.2-201ENST00000482477 511 ntBASIC24.08■■□□□ 1.45
RAXQ9Y2V3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RAXQ9Y2V3 KRT8P33-201ENST00000508125 1423 ntBASIC24.08■■□□□ 1.44
RAXQ9Y2V3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
RAXQ9Y2V3 AC009831.1-201ENST00000580420 1582 ntBASIC24.08■■□□□ 1.44
RAXQ9Y2V3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
RAXQ9Y2V3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RAXQ9Y2V3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RAXQ9Y2V3 AC007029.1-201ENST00000604183 313 ntBASIC24.07■■□□□ 1.44
RAXQ9Y2V3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
RAXQ9Y2V3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
RAXQ9Y2V3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RAXQ9Y2V3 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RAXQ9Y2V3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.06■■□□□ 1.44
RAXQ9Y2V3 AC126177.7-201ENST00000547904 679 ntBASIC24.06■■□□□ 1.44
RAXQ9Y2V3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RAXQ9Y2V3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RAXQ9Y2V3 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
RAXQ9Y2V3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RAXQ9Y2V3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RAXQ9Y2V3 BHLHE23-202ENST00000612929 1109 ntBASIC24.05■■□□□ 1.44
RAXQ9Y2V3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RAXQ9Y2V3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
RAXQ9Y2V3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RAXQ9Y2V3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
RAXQ9Y2V3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RAXQ9Y2V3 AL161658.1-201ENST00000623641 1967 ntBASIC24.02■■□□□ 1.44
RAXQ9Y2V3 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.02■■□□□ 1.44
RAXQ9Y2V3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RAXQ9Y2V3 AL157400.5-201ENST00000507624 621 ntBASIC24.02■■□□□ 1.44
RAXQ9Y2V3 AC010980.1-201ENST00000587192 1142 ntBASIC24.02■■□□□ 1.44
RAXQ9Y2V3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RAXQ9Y2V3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RAXQ9Y2V3 RP9P-202ENST00000450133 1212 ntBASIC24.01■■□□□ 1.43
RAXQ9Y2V3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.01■■□□□ 1.43
RAXQ9Y2V3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24■■□□□ 1.43
RAXQ9Y2V3 AC127502.1-201ENST00000399971 1502 ntBASIC24■■□□□ 1.43
RAXQ9Y2V3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAXQ9Y2V3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAXQ9Y2V3 MED25-210ENST00000612854 801 ntTSL 5 BASIC24■■□□□ 1.43
RAXQ9Y2V3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24■■□□□ 1.43
RAXQ9Y2V3 MED25-214ENST00000622402 642 ntTSL 5 BASIC24■■□□□ 1.43
RAXQ9Y2V3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24■■□□□ 1.43
RAXQ9Y2V3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
RAXQ9Y2V3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
RAXQ9Y2V3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAXQ9Y2V3 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC23.99■■□□□ 1.43
RAXQ9Y2V3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RAXQ9Y2V3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.99■■□□□ 1.43
RAXQ9Y2V3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.99■■□□□ 1.43
RAXQ9Y2V3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAXQ9Y2V3 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAXQ9Y2V3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAXQ9Y2V3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAXQ9Y2V3 GUSBP5-201ENST00000418136 578 ntBASIC23.97■■□□□ 1.43
RAXQ9Y2V3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.97■■□□□ 1.43
RAXQ9Y2V3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.97■■□□□ 1.43
RAXQ9Y2V3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.97■■□□□ 1.43
RAXQ9Y2V3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RAXQ9Y2V3 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.97■■□□□ 1.43
RAXQ9Y2V3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.96■■□□□ 1.43
RAXQ9Y2V3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAXQ9Y2V3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.96■■□□□ 1.43
RAXQ9Y2V3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
RAXQ9Y2V3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
RAXQ9Y2V3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.95■■□□□ 1.42
RAXQ9Y2V3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms