Protein–RNA interactions for Protein: Q9NR30

DDX21, Nucleolar RNA helicase 2, humanhuman

Known RBP eCLIP

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21Q9NR30 RHAG-201ENST00000229810 1283 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.255e-7■□□□□ 10.1
DDX21Q9NR30 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.35e-7■□□□□ 10.1
DDX21Q9NR30 RHAG-203ENST00000618248 1203 ntTSL 5 BASIC13.08□□□□□ -0.325e-7■□□□□ 10.1
DDX21Q9NR30 EIF4A1-209ENST00000578495 916 ntTSL 512.91□□□□□ -0.345e-7■□□□□ 10.1
DDX21Q9NR30 EIF4A1-215ENST00000580886 562 ntTSL 212.88□□□□□ -0.355e-7■□□□□ 10.1
DDX21Q9NR30 EIF4A1-231ENST00000584054 716 ntTSL 212.88□□□□□ -0.355e-7■□□□□ 10.1
DDX21Q9NR30 EIF4A1-217ENST00000581384 642 ntTSL 512.82□□□□□ -0.365e-7■□□□□ 10.1
DDX21Q9NR30 EIF4A1-233ENST00000584784 818 ntTSL 512.33□□□□□ -0.445e-7■□□□□ 10.1
DDX21Q9NR30 EIF4A1-232ENST00000584712 782 ntTSL 212.28□□□□□ -0.445e-7■□□□□ 10.1
DDX21Q9NR30 EIF4A1-212ENST00000579085 569 ntTSL 411.79□□□□□ -0.525e-7■□□□□ 10.1
DDX21Q9NR30 EIF4A1-237ENST00000585024 577 ntTSL 411.29□□□□□ -0.65e-7■□□□□ 10.1
DDX21Q9NR30 EIF4A1-202ENST00000396527 1169 ntTSL 29.55□□□□□ -0.885e-7■□□□□ 10.1
DDX21Q9NR30 EIF4A1-230ENST00000583899 665 ntTSL 38.15□□□□□ -1.15e-7■□□□□ 10.1
DDX21Q9NR30 EIF4A1-211ENST00000578754 547 ntTSL 47.07□□□□□ -1.285e-7■□□□□ 10.1
DDX21Q9NR30 EIF4A1-224ENST00000582213 560 ntTSL 45.21□□□□□ -1.585e-7■□□□□ 10.1
DDX21Q9NR30 GNAS-243ENST00000484504 662 ntTSL 236.21■■■■□ 3.395e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-244ENST00000485673 715 ntTSL 536.21■■■■□ 3.395e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-256ENST00000603546 573 ntTSL 535.55■■■■□ 3.285e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-257ENST00000604005 693 ntTSL 334.15■■■■□ 3.065e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-228ENST00000469431 702 ntTSL 534.15■■■■□ 3.065e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-235ENST00000478585 543 ntTSL 234.15■■■■□ 3.065e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-229ENST00000470512 913 ntTSL 532.79■■■□□ 2.845e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-224ENST00000464960 986 ntTSL 232.68■■■□□ 2.825e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-237ENST00000480232 893 ntTSL 532.43■■■□□ 2.785e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.13■■■□□ 2.735e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.13■■■□□ 2.735e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.07■■■□□ 2.725e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-233ENST00000476935 828 ntTSL 330.94■■■□□ 2.545e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-234ENST00000477931 1663 ntTSL 1 (best)30.39■■■□□ 2.455e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC28.83■■■□□ 2.215e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-248ENST00000488652 953 ntTSL 527.77■■■□□ 2.045e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-238ENST00000480975 1534 ntTSL 525.32■■□□□ 1.645e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-226ENST00000467321 733 ntTSL 524.73■■□□□ 1.555e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-240ENST00000481768 1903 ntTSL 1 (best)24.02■■□□□ 1.445e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-220ENST00000461152 278 ntTSL 524.01■■□□□ 1.435e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-230ENST00000472183 911 ntTSL 323.51■■□□□ 1.355e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-250ENST00000491348 1068 ntTSL 323.51■■□□□ 1.355e-6■□□□□ 9.8
DDX21Q9NR30 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.355e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC20.76■□□□□ 0.915e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-223ENST00000464788 583 ntTSL 220.61■□□□□ 0.895e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-249ENST00000490374 675 ntTSL 319.51■□□□□ 0.715e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-221ENST00000462499 492 ntTSL 218.97■□□□□ 0.635e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-241ENST00000482112 704 ntTSL 318.97■□□□□ 0.635e-6■□□□□ 9.8
DDX21Q9NR30 ZNF316-202ENST00000427912 520 ntTSL 318.81■□□□□ 0.65e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-206ENST00000349036 581 ntTSL 517.36■□□□□ 0.375e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-219ENST00000453292 632 ntTSL 516.93■□□□□ 0.35e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.58■□□□□ 0.245e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-222ENST00000464624 3764 ntTSL 516.23■□□□□ 0.195e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-247ENST00000488546 897 ntTSL 515.56■□□□□ 0.085e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-209ENST00000371081 730 ntTSL 2 BASIC15.49■□□□□ 0.075e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-252ENST00000493744 812 ntTSL 215.4■□□□□ 0.065e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-239ENST00000481039 756 ntTSL 515.26■□□□□ 0.035e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-205ENST00000338783 641 ntTSL 314.9□□□□□ -0.025e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-217ENST00000423897 736 ntTSL 314.9□□□□□ -0.025e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC14.24□□□□□ -0.135e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-216ENST00000419558 729 ntTSL 313.88□□□□□ -0.195e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-218ENST00000450130 595 ntTSL 512.96□□□□□ -0.335e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-208ENST00000371075 2551 ntTSL 1 (best) BASIC12.63□□□□□ -0.395e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-204ENST00000313949 2578 ntTSL 1 (best) BASIC12.23□□□□□ -0.455e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-227ENST00000468895 583 ntTSL 311.34□□□□□ -0.595e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-251ENST00000492907 790 ntTSL 311.34□□□□□ -0.595e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-225ENST00000467227 543 ntTSL 310.09□□□□□ -0.795e-6■□□□□ 9.8
DDX21Q9NR30 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.49□□□□□ -1.375e-6■□□□□ 9.8
DDX21Q9NR30 THAP9-AS1-202ENST00000504520 2770 ntTSL 1 (best) BASIC14.72□□□□□ -0.051e-26■□□□□ 9.7
DDX21Q9NR30 SEC31A-218ENST00000506495 541 ntTSL 412.74□□□□□ -0.371e-26■□□□□ 9.7
DDX21Q9NR30 THAP9-AS1-208ENST00000508772 566 ntTSL 412.74□□□□□ -0.371e-26■□□□□ 9.7
DDX21Q9NR30 SEC31A-220ENST00000507051 458 ntTSL 412.29□□□□□ -0.441e-26■□□□□ 9.7
DDX21Q9NR30 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC11.35□□□□□ -0.591e-26■□□□□ 9.7
DDX21Q9NR30 THAP9-AS1-210ENST00000511271 516 ntTSL 211.18□□□□□ -0.621e-26■□□□□ 9.7
DDX21Q9NR30 SEC31A-222ENST00000507676 551 ntTSL 49.65□□□□□ -0.861e-26■□□□□ 9.7
DDX21Q9NR30 THAP9-AS1-211ENST00000512932 971 ntTSL 29.12□□□□□ -0.951e-26■□□□□ 9.7
DDX21Q9NR30 SEC31A-211ENST00000503210 553 ntTSL 49.1□□□□□ -0.951e-26■□□□□ 9.7
DDX21Q9NR30 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.24□□□□□ -1.411e-26■□□□□ 9.7
DDX21Q9NR30 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC14.66□□□□□ -0.068e-7■□□□□ 9.7
DDX21Q9NR30 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.318e-7■□□□□ 9.7
DDX21Q9NR30 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.978e-7■□□□□ 9.7
DDX21Q9NR30 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC7.92□□□□□ -1.148e-7■□□□□ 9.7
DDX21Q9NR30 KLC1-211ENST00000538504 822 ntTSL 229.87■■■□□ 2.373e-6■□□□□ 9.6
DDX21Q9NR30 KLC1-226ENST00000557686 535 ntTSL 328.16■■■□□ 2.13e-6■□□□□ 9.6
DDX21Q9NR30 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.7■■■□□ 2.033e-6■□□□□ 9.6
DDX21Q9NR30 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.42■■□□□ 1.53e-6■□□□□ 9.6
DDX21Q9NR30 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.19■■□□□ 1.463e-6■□□□□ 9.6
DDX21Q9NR30 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC23.28■■□□□ 1.323e-6■□□□□ 9.6
DDX21Q9NR30 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.042e-13■□□□□ 9.6
DDX21Q9NR30 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.12■□□□□ 0.973e-6■□□□□ 9.6
DDX21Q9NR30 PRPF39-202ENST00000424478 3174 ntTSL 217.16■□□□□ 0.342e-13■□□□□ 9.6
DDX21Q9NR30 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.23e-6■□□□□ 9.6
DDX21Q9NR30 PRPF39-203ENST00000477626 3507 ntTSL 215.38■□□□□ 0.052e-13■□□□□ 9.6
DDX21Q9NR30 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.043e-6■□□□□ 9.6
DDX21Q9NR30 DMTF1-238ENST00000584619 1645 ntTSL 514.48□□□□□ -0.093e-6■□□□□ 9.6
DDX21Q9NR30 DMTF1-233ENST00000582887 562 ntTSL 313.04□□□□□ -0.323e-6■□□□□ 9.6
DDX21Q9NR30 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC9.62□□□□□ -0.873e-6■□□□□ 9.6
DDX21Q9NR30 DMTF1-221ENST00000473521 590 ntTSL 48.96□□□□□ -0.983e-6■□□□□ 9.6
DDX21Q9NR30 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC8.42□□□□□ -1.063e-6■□□□□ 9.6
DDX21Q9NR30 DMTF1-216ENST00000447863 3954 ntTSL 1 (best)8.33□□□□□ -1.083e-6■□□□□ 9.6
DDX21Q9NR30 CLTC-211ENST00000579815 609 ntTSL 57.61□□□□□ -1.193e-6■□□□□ 9.6
DDX21Q9NR30 DMTF1-225ENST00000578926 438 ntTSL 37.48□□□□□ -1.213e-6■□□□□ 9.6
DDX21Q9NR30 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC7.38□□□□□ -1.233e-6■□□□□ 9.6
DDX21Q9NR30 DMTF1-227ENST00000579677 3915 ntTSL 1 (best)7.17□□□□□ -1.263e-6■□□□□ 9.6
DDX21Q9NR30 DMTF1-203ENST00000412139 4460 ntTSL 26.22□□□□□ -1.413e-6■□□□□ 9.6
Retrieved 100 of 1,140 protein–RNA pairs in 119.2 ms