RNA–Protein interactions for RNA: ENST00000579815.1

CLTC-211, Transcript of clathrin heavy chain, humanhuman

TSL 5

Gene CLTC, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-211ENST00000579815 AEBP2Q6ZN18 517 aaPredicted RBP26.43■■□□□ 1.82
CLTC-211ENST00000579815 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
CLTC-211ENST00000579815 PHF23Q9BUL5 403 aaPredicted RBP22.33■■□□□ 1.17
CLTC-211ENST00000579815 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
CLTC-211ENST00000579815 FOXD1Q16676 465 aa20.86■□□□□ 0.93
CLTC-211ENST00000579815 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
CLTC-211ENST00000579815 PPP6R1Q9UPN7 881 aa19.85■□□□□ 0.77
CLTC-211ENST00000579815 ADRA2BP18089 450 aa19.78■□□□□ 0.76
CLTC-211ENST00000579815 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
CLTC-211ENST00000579815 MSH5O43196 834 aa19.2■□□□□ 0.66
CLTC-211ENST00000579815 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
CLTC-211ENST00000579815 MAPK8IP2Q13387 824 aaPredicted RBP18.1■□□□□ 0.49
CLTC-211ENST00000579815 PPP4R3CPQ6ZMV5 832 aa17.9■□□□□ 0.46
CLTC-211ENST00000579815 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
CLTC-211ENST00000579815 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.44
CLTC-211ENST00000579815 CNKSR2Q8WXI2 1034 aa17.41■□□□□ 0.38
CLTC-211ENST00000579815 HOXD11P31277 338 aaPredicted RBP17.24■□□□□ 0.35
CLTC-211ENST00000579815 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
CLTC-211ENST00000579815 RNF216Q9NWF9 866 aaPredicted RBP17.17■□□□□ 0.34
CLTC-211ENST00000579815 KCNA4P22459 653 aa17.15■□□□□ 0.34
CLTC-211ENST00000579815 NPM3O75607 178 aaKnown RBP17.12■□□□□ 0.33
CLTC-211ENST00000579815 DCAF8L1A6NGE4 600 aa17.03■□□□□ 0.32
CLTC-211ENST00000579815 DNAJC5BQ9UF47 199 aa16.53■□□□□ 0.24
CLTC-211ENST00000579815 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
CLTC-211ENST00000579815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.41■□□□□ 0.223e-6■□□□□ 8.3
CLTC-211ENST00000579815 CACNB1Q02641 598 aaPredicted RBP16.33■□□□□ 0.2
CLTC-211ENST00000579815 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
CLTC-211ENST00000579815 C1QBPQ07021 282 aaKnown RBP16.21■□□□□ 0.19
CLTC-211ENST00000579815 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
CLTC-211ENST00000579815 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
CLTC-211ENST00000579815 SPINK5Q9NQ38 1064 aaPredicted RBP15.9■□□□□ 0.14
CLTC-211ENST00000579815 ZBTB22O15209 634 aa15.85■□□□□ 0.13
CLTC-211ENST00000579815 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.12
CLTC-211ENST00000579815 CAPN15O75808 1086 aa15.75■□□□□ 0.11
CLTC-211ENST00000579815 MYCNP04198 464 aaPredicted RBP15.72■□□□□ 0.11
CLTC-211ENST00000579815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
CLTC-211ENST00000579815 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
CLTC-211ENST00000579815 SAMD1Q6SPF0 538 aaPredicted RBP15.62■□□□□ 0.09
CLTC-211ENST00000579815 DSG3P32926 999 aa15.61■□□□□ 0.09
CLTC-211ENST00000579815 TRHP20396 242 aaPredicted RBP15.6■□□□□ 0.09
CLTC-211ENST00000579815 ATF5Q9Y2D1 282 aaPredicted RBP15.53■□□□□ 0.08
CLTC-211ENST00000579815 ABCB7O75027 752 aa15.51■□□□□ 0.07
CLTC-211ENST00000579815 APLP2Q06481 763 aa15.49■□□□□ 0.07
CLTC-211ENST00000579815 ZNF219Q9P2Y4 722 aaPredicted RBP15.47■□□□□ 0.07
CLTC-211ENST00000579815 EHMT2Q96KQ7 1210 aa15.37■□□□□ 0.05
CLTC-211ENST00000579815 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
CLTC-211ENST00000579815 POLA2Q14181 598 aa15.26■□□□□ 0.03
CLTC-211ENST00000579815 ATXN8OSP0DMR3 200 aa15.16■□□□□ 0.02
CLTC-211ENST00000579815 OSCARQ8IYS5 282 aa14.82□□□□□ -0.04
CLTC-211ENST00000579815 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
CLTC-211ENST00000579815 ZBTB12Q9Y330 459 aaPredicted RBP14.81□□□□□ -0.04
CLTC-211ENST00000579815 RBM42Q9BTD8 480 aaKnown RBP14.71□□□□□ -0.05
CLTC-211ENST00000579815 FBLN2P98095 1184 aa14.65□□□□□ -0.06
CLTC-211ENST00000579815 AKT1S1Q96B36 256 aa14.52□□□□□ -0.09
CLTC-211ENST00000579815 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
CLTC-211ENST00000579815 SPDYE2BA6NHP3 402 aa14.46□□□□□ -0.09
CLTC-211ENST00000579815 SPDYE6P0CI01 402 aa14.46□□□□□ -0.09
CLTC-211ENST00000579815 SPDYE2Q495Y8 402 aa14.46□□□□□ -0.09
CLTC-211ENST00000579815 SSUH2Q9Y2M2 353 aa14.39□□□□□ -0.11
CLTC-211ENST00000579815 CHRDL2Q6WN34 429 aa14.38□□□□□ -0.11
CLTC-211ENST00000579815 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
CLTC-211ENST00000579815 POTEHQ6S545 545 aa14.37□□□□□ -0.11
CLTC-211ENST00000579815 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
CLTC-211ENST00000579815 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.13
CLTC-211ENST00000579815 PIP4P2Q8N4L2 257 aa14.17□□□□□ -0.14
CLTC-211ENST00000579815 SPDYE4A6NLX3 237 aa14.16□□□□□ -0.14
CLTC-211ENST00000579815 CLEC11AQ9Y240 323 aa14.14□□□□□ -0.15
CLTC-211ENST00000579815 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
CLTC-211ENST00000579815 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.153e-11■■■■■ 39.7
CLTC-211ENST00000579815 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
CLTC-211ENST00000579815 CHADLQ6NUI6 762 aa13.94□□□□□ -0.18
CLTC-211ENST00000579815 PRR29P0C7W0 189 aa13.91□□□□□ -0.18
CLTC-211ENST00000579815 PROM2Q8N271 834 aa13.91□□□□□ -0.18
CLTC-211ENST00000579815 FKBP8Q14318 412 aa13.87□□□□□ -0.19
CLTC-211ENST00000579815 EVX2Q03828 476 aa13.78□□□□□ -0.2
CLTC-211ENST00000579815 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
CLTC-211ENST00000579815 HAX1O00165 279 aa13.75□□□□□ -0.21
CLTC-211ENST00000579815 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
CLTC-211ENST00000579815 FARP1Q9Y4F1 1045 aaPredicted RBP13.68□□□□□ -0.22
CLTC-211ENST00000579815 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
CLTC-211ENST00000579815 SP7Q8TDD2 431 aaPredicted RBP13.62□□□□□ -0.23
CLTC-211ENST00000579815 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
CLTC-211ENST00000579815 CD44P16070 742 aaKnown RBP13.5□□□□□ -0.25
CLTC-211ENST00000579815 MIER1Q8N108 512 aa13.44□□□□□ -0.26
CLTC-211ENST00000579815 NISCHQ9Y2I1 1504 aa13.44□□□□□ -0.26
CLTC-211ENST00000579815 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
CLTC-211ENST00000579815 ZRANB1Q9UGI0 708 aa13.37□□□□□ -0.27
CLTC-211ENST00000579815 GABBR2O75899 941 aa13.36□□□□□ -0.27
CLTC-211ENST00000579815 NPM1P06748 294 aaKnown RBP eCLIP13.34□□□□□ -0.27
CLTC-211ENST00000579815 PHF12Q96QT6 1004 aa13.31□□□□□ -0.28
CLTC-211ENST00000579815 ZNF579Q8NAF0 562 aaKnown RBP13.3□□□□□ -0.28
CLTC-211ENST00000579815 FBXO3Q9UK99 471 aa13.29□□□□□ -0.28
CLTC-211ENST00000579815 VASPP50552 380 aaPredicted RBP13.28□□□□□ -0.28
CLTC-211ENST00000579815 RASEFQ8IZ41 740 aa13.28□□□□□ -0.28
CLTC-211ENST00000579815 TSPYL2Q9H2G4 693 aaPredicted RBP13.26□□□□□ -0.29
CLTC-211ENST00000579815 PLEKHG5O94827 1062 aa13.23□□□□□ -0.29
CLTC-211ENST00000579815 NUBP1P53384 320 aa13.22□□□□□ -0.29
CLTC-211ENST00000579815 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
CLTC-211ENST00000579815 PAK3O75914 559 aaPredicted RBP13.19□□□□□ -0.3
CLTC-211ENST00000579815 POTEIP0CG38 1075 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms