Protein–RNA interactions for Protein: Q9HBM1

SPC25, Kinetochore protein Spc25, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25Q9HBM1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.66■■■□□ 2.18
SPC25Q9HBM1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SPC25Q9HBM1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
SPC25Q9HBM1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.66■■■□□ 2.18
SPC25Q9HBM1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SPC25Q9HBM1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SPC25Q9HBM1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SPC25Q9HBM1 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SPC25Q9HBM1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.65■■■□□ 2.18
SPC25Q9HBM1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.64■■■□□ 2.18
SPC25Q9HBM1 AC092296.2-201ENST00000589470 999 ntBASIC28.64■■■□□ 2.18
SPC25Q9HBM1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
SPC25Q9HBM1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.63■■■□□ 2.17
SPC25Q9HBM1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.63■■■□□ 2.17
SPC25Q9HBM1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SPC25Q9HBM1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SPC25Q9HBM1 ECEL1P2-201ENST00000461596 1295 ntBASIC28.62■■■□□ 2.17
SPC25Q9HBM1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
SPC25Q9HBM1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SPC25Q9HBM1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SPC25Q9HBM1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
SPC25Q9HBM1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
SPC25Q9HBM1 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SPC25Q9HBM1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.58■■■□□ 2.17
SPC25Q9HBM1 TSPY13P-201ENST00000338964 914 ntBASIC28.58■■■□□ 2.17
SPC25Q9HBM1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
SPC25Q9HBM1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.58■■■□□ 2.17
SPC25Q9HBM1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.58■■■□□ 2.17
SPC25Q9HBM1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.57■■■□□ 2.16
SPC25Q9HBM1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SPC25Q9HBM1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.56■■■□□ 2.16
SPC25Q9HBM1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SPC25Q9HBM1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPC25Q9HBM1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
SPC25Q9HBM1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SPC25Q9HBM1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SPC25Q9HBM1 KRT18P60-201ENST00000312876 1297 ntBASIC28.54■■■□□ 2.16
SPC25Q9HBM1 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
SPC25Q9HBM1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPC25Q9HBM1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
SPC25Q9HBM1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SPC25Q9HBM1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.53■■■□□ 2.16
SPC25Q9HBM1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPC25Q9HBM1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SPC25Q9HBM1 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SPC25Q9HBM1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.52■■■□□ 2.16
SPC25Q9HBM1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.51■■■□□ 2.15
SPC25Q9HBM1 AC004987.1-201ENST00000428627 508 ntBASIC28.51■■■□□ 2.15
SPC25Q9HBM1 ATP5G2P3-201ENST00000429083 425 ntBASIC28.51■■■□□ 2.15
SPC25Q9HBM1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
SPC25Q9HBM1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.49■■■□□ 2.15
SPC25Q9HBM1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.49■■■□□ 2.15
SPC25Q9HBM1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SPC25Q9HBM1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
SPC25Q9HBM1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.48■■■□□ 2.15
SPC25Q9HBM1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SPC25Q9HBM1 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.47■■■□□ 2.15
SPC25Q9HBM1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.47■■■□□ 2.15
SPC25Q9HBM1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
SPC25Q9HBM1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
SPC25Q9HBM1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
SPC25Q9HBM1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
SPC25Q9HBM1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.46■■■□□ 2.15
SPC25Q9HBM1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
SPC25Q9HBM1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.14
SPC25Q9HBM1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
SPC25Q9HBM1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
SPC25Q9HBM1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.44■■■□□ 2.14
SPC25Q9HBM1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.44■■■□□ 2.14
SPC25Q9HBM1 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.44■■■□□ 2.14
SPC25Q9HBM1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
SPC25Q9HBM1 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.44■■■□□ 2.14
SPC25Q9HBM1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SPC25Q9HBM1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SPC25Q9HBM1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SPC25Q9HBM1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.43■■■□□ 2.14
SPC25Q9HBM1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
SPC25Q9HBM1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SPC25Q9HBM1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
SPC25Q9HBM1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.43■■■□□ 2.14
SPC25Q9HBM1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.43■■■□□ 2.14
SPC25Q9HBM1 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.43■■■□□ 2.14
SPC25Q9HBM1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SPC25Q9HBM1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
SPC25Q9HBM1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
SPC25Q9HBM1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.42■■■□□ 2.14
SPC25Q9HBM1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.42■■■□□ 2.14
SPC25Q9HBM1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPC25Q9HBM1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
SPC25Q9HBM1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPC25Q9HBM1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPC25Q9HBM1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPC25Q9HBM1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SPC25Q9HBM1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.4■■■□□ 2.14
SPC25Q9HBM1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SPC25Q9HBM1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SPC25Q9HBM1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
SPC25Q9HBM1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SPC25Q9HBM1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
SPC25Q9HBM1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.39■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms