Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DUX3Q96PT4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DUX3Q96PT4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DUX3Q96PT4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DUX3Q96PT4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DUX3Q96PT4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.68■□□□□ 0.74
DUX3Q96PT4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
DUX3Q96PT4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DUX3Q96PT4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DUX3Q96PT4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DUX3Q96PT4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
DUX3Q96PT4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DUX3Q96PT4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
DUX3Q96PT4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
DUX3Q96PT4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DUX3Q96PT4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DUX3Q96PT4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.66■□□□□ 0.74
DUX3Q96PT4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DUX3Q96PT4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DUX3Q96PT4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.66■□□□□ 0.74
DUX3Q96PT4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.66■□□□□ 0.74
DUX3Q96PT4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.66■□□□□ 0.74
DUX3Q96PT4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DUX3Q96PT4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DUX3Q96PT4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DUX3Q96PT4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DUX3Q96PT4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DUX3Q96PT4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.65■□□□□ 0.74
DUX3Q96PT4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.64■□□□□ 0.74
DUX3Q96PT4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DUX3Q96PT4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.64■□□□□ 0.73
DUX3Q96PT4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DUX3Q96PT4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DUX3Q96PT4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
DUX3Q96PT4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DUX3Q96PT4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
DUX3Q96PT4 AC100797.4-201ENST00000631653 1827 ntBASIC19.63■□□□□ 0.73
DUX3Q96PT4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DUX3Q96PT4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC19.63■□□□□ 0.73
DUX3Q96PT4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DUX3Q96PT4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
DUX3Q96PT4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DUX3Q96PT4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DUX3Q96PT4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DUX3Q96PT4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DUX3Q96PT4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.62■□□□□ 0.73
DUX3Q96PT4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.62■□□□□ 0.73
DUX3Q96PT4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DUX3Q96PT4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DUX3Q96PT4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
DUX3Q96PT4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
DUX3Q96PT4 GPX1-201ENST00000419349 1106 ntBASIC19.61■□□□□ 0.73
DUX3Q96PT4 AC008813.1-201ENST00000536597 885 ntBASIC19.61■□□□□ 0.73
DUX3Q96PT4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.61■□□□□ 0.73
DUX3Q96PT4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.61■□□□□ 0.73
DUX3Q96PT4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
DUX3Q96PT4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
DUX3Q96PT4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
DUX3Q96PT4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.6■□□□□ 0.73
DUX3Q96PT4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.6■□□□□ 0.73
DUX3Q96PT4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
DUX3Q96PT4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DUX3Q96PT4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.59■□□□□ 0.73
DUX3Q96PT4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
DUX3Q96PT4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DUX3Q96PT4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
DUX3Q96PT4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DUX3Q96PT4 AL139393.2-201ENST00000608721 2025 ntBASIC19.59■□□□□ 0.73
DUX3Q96PT4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.59■□□□□ 0.73
DUX3Q96PT4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.58■□□□□ 0.73
DUX3Q96PT4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.58■□□□□ 0.72
DUX3Q96PT4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DUX3Q96PT4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
DUX3Q96PT4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DUX3Q96PT4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DUX3Q96PT4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DUX3Q96PT4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DUX3Q96PT4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.56■□□□□ 0.72
DUX3Q96PT4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.56■□□□□ 0.72
DUX3Q96PT4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.55■□□□□ 0.72
DUX3Q96PT4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DUX3Q96PT4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DUX3Q96PT4 ABCB10P3-201ENST00000561950 2166 ntBASIC19.55■□□□□ 0.72
DUX3Q96PT4 AC022413.1-201ENST00000624602 984 ntBASIC19.55■□□□□ 0.72
DUX3Q96PT4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DUX3Q96PT4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
DUX3Q96PT4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
DUX3Q96PT4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.54■□□□□ 0.72
DUX3Q96PT4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.54■□□□□ 0.72
DUX3Q96PT4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.54■□□□□ 0.72
DUX3Q96PT4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.53■□□□□ 0.72
DUX3Q96PT4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
DUX3Q96PT4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DUX3Q96PT4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DUX3Q96PT4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
DUX3Q96PT4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
DUX3Q96PT4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
DUX3Q96PT4 MIR219A2-201ENST00000608502 1504 ntBASIC19.52■□□□□ 0.72
DUX3Q96PT4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
DUX3Q96PT4 AP004833.2-201ENST00000532228 1454 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 895.1 ms