Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ZSWIM3Q96MP5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ZSWIM3Q96MP5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ZSWIM3Q96MP5 MIR219A2-201ENST00000608502 1504 ntBASIC26.58■■□□□ 1.85
ZSWIM3Q96MP5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
ZSWIM3Q96MP5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
ZSWIM3Q96MP5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZSWIM3Q96MP5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
ZSWIM3Q96MP5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.57■■□□□ 1.84
ZSWIM3Q96MP5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ZSWIM3Q96MP5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.56■■□□□ 1.84
ZSWIM3Q96MP5 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ZSWIM3Q96MP5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.55■■□□□ 1.84
ZSWIM3Q96MP5 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZSWIM3Q96MP5 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.55■■□□□ 1.84
ZSWIM3Q96MP5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.55■■□□□ 1.84
ZSWIM3Q96MP5 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.55■■□□□ 1.84
ZSWIM3Q96MP5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZSWIM3Q96MP5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ZSWIM3Q96MP5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ZSWIM3Q96MP5 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
ZSWIM3Q96MP5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
ZSWIM3Q96MP5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.54■■□□□ 1.84
ZSWIM3Q96MP5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZSWIM3Q96MP5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.53■■□□□ 1.84
ZSWIM3Q96MP5 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
ZSWIM3Q96MP5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ZSWIM3Q96MP5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
ZSWIM3Q96MP5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZSWIM3Q96MP5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ZSWIM3Q96MP5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ZSWIM3Q96MP5 ST7-AS1-201ENST00000456775 1889 ntBASIC26.51■■□□□ 1.83
ZSWIM3Q96MP5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ZSWIM3Q96MP5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZSWIM3Q96MP5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZSWIM3Q96MP5 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ZSWIM3Q96MP5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.5■■□□□ 1.83
ZSWIM3Q96MP5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ZSWIM3Q96MP5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ZSWIM3Q96MP5 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ZSWIM3Q96MP5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ZSWIM3Q96MP5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.48■■□□□ 1.83
ZSWIM3Q96MP5 U85056.1-201ENST00000616429 682 ntBASIC26.48■■□□□ 1.83
ZSWIM3Q96MP5 AC012354.3-201ENST00000623734 483 ntBASIC26.48■■□□□ 1.83
ZSWIM3Q96MP5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
ZSWIM3Q96MP5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ZSWIM3Q96MP5 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.46■■□□□ 1.83
ZSWIM3Q96MP5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
ZSWIM3Q96MP5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.46■■□□□ 1.83
ZSWIM3Q96MP5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.46■■□□□ 1.83
ZSWIM3Q96MP5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.45■■□□□ 1.83
ZSWIM3Q96MP5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
ZSWIM3Q96MP5 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.45■■□□□ 1.82
ZSWIM3Q96MP5 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
ZSWIM3Q96MP5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
ZSWIM3Q96MP5 AC092296.2-201ENST00000589470 999 ntBASIC26.45■■□□□ 1.82
ZSWIM3Q96MP5 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.44■■□□□ 1.82
ZSWIM3Q96MP5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
ZSWIM3Q96MP5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ZSWIM3Q96MP5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
ZSWIM3Q96MP5 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.43■■□□□ 1.82
ZSWIM3Q96MP5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
ZSWIM3Q96MP5 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
ZSWIM3Q96MP5 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.43■■□□□ 1.82
ZSWIM3Q96MP5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ZSWIM3Q96MP5 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.42■■□□□ 1.82
ZSWIM3Q96MP5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.42■■□□□ 1.82
ZSWIM3Q96MP5 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.42■■□□□ 1.82
ZSWIM3Q96MP5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ZSWIM3Q96MP5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ZSWIM3Q96MP5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
ZSWIM3Q96MP5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.41■■□□□ 1.82
ZSWIM3Q96MP5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
ZSWIM3Q96MP5 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ZSWIM3Q96MP5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZSWIM3Q96MP5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
ZSWIM3Q96MP5 AL033527.3-201ENST00000566366 1196 ntBASIC26.4■■□□□ 1.82
ZSWIM3Q96MP5 AC018358.1-201ENST00000631079 1402 ntBASIC26.39■■□□□ 1.82
ZSWIM3Q96MP5 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ZSWIM3Q96MP5 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
ZSWIM3Q96MP5 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.38■■□□□ 1.81
ZSWIM3Q96MP5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
ZSWIM3Q96MP5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ZSWIM3Q96MP5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
ZSWIM3Q96MP5 AC100797.4-201ENST00000631653 1827 ntBASIC26.37■■□□□ 1.81
ZSWIM3Q96MP5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ZSWIM3Q96MP5 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZSWIM3Q96MP5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ZSWIM3Q96MP5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
ZSWIM3Q96MP5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ZSWIM3Q96MP5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ZSWIM3Q96MP5 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.34■■□□□ 1.81
ZSWIM3Q96MP5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
ZSWIM3Q96MP5 ECEL1P2-201ENST00000461596 1295 ntBASIC26.34■■□□□ 1.81
ZSWIM3Q96MP5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
ZSWIM3Q96MP5 AP004833.2-201ENST00000532228 1454 ntBASIC26.34■■□□□ 1.81
ZSWIM3Q96MP5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ZSWIM3Q96MP5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZSWIM3Q96MP5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ZSWIM3Q96MP5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms