Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RNF139Q8WU17 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RNF139Q8WU17 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RNF139Q8WU17 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RNF139Q8WU17 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.71■■□□□ 1.87
RNF139Q8WU17 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
RNF139Q8WU17 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RNF139Q8WU17 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RNF139Q8WU17 MIR639-201ENST00000384974 98 ntBASIC26.7■■□□□ 1.86
RNF139Q8WU17 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.7■■□□□ 1.86
RNF139Q8WU17 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF139Q8WU17 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF139Q8WU17 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF139Q8WU17 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF139Q8WU17 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
RNF139Q8WU17 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RNF139Q8WU17 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
RNF139Q8WU17 AC110285.7-201ENST00000624417 1536 ntBASIC26.68■■□□□ 1.86
RNF139Q8WU17 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RNF139Q8WU17 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.67■■□□□ 1.86
RNF139Q8WU17 AC100797.4-201ENST00000631653 1827 ntBASIC26.67■■□□□ 1.86
RNF139Q8WU17 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.67■■□□□ 1.86
RNF139Q8WU17 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
RNF139Q8WU17 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.65■■□□□ 1.86
RNF139Q8WU17 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.65■■□□□ 1.86
RNF139Q8WU17 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
RNF139Q8WU17 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RNF139Q8WU17 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.65■■□□□ 1.86
RNF139Q8WU17 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RNF139Q8WU17 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF139Q8WU17 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
RNF139Q8WU17 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.63■■□□□ 1.85
RNF139Q8WU17 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
RNF139Q8WU17 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.62■■□□□ 1.85
RNF139Q8WU17 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF139Q8WU17 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.62■■□□□ 1.85
RNF139Q8WU17 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF139Q8WU17 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.61■■□□□ 1.85
RNF139Q8WU17 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
RNF139Q8WU17 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
RNF139Q8WU17 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RNF139Q8WU17 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.6■■□□□ 1.85
RNF139Q8WU17 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
RNF139Q8WU17 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RNF139Q8WU17 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RNF139Q8WU17 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
RNF139Q8WU17 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.59■■□□□ 1.85
RNF139Q8WU17 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RNF139Q8WU17 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RNF139Q8WU17 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
RNF139Q8WU17 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF139Q8WU17 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF139Q8WU17 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RNF139Q8WU17 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF139Q8WU17 DRD5P2-201ENST00000421395 2012 ntBASIC26.56■■□□□ 1.84
RNF139Q8WU17 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.56■■□□□ 1.84
RNF139Q8WU17 MIR4449-201ENST00000578365 66 ntBASIC26.56■■□□□ 1.84
RNF139Q8WU17 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF139Q8WU17 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RNF139Q8WU17 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF139Q8WU17 AC008813.1-201ENST00000536597 885 ntBASIC26.55■■□□□ 1.84
RNF139Q8WU17 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RNF139Q8WU17 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF139Q8WU17 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
RNF139Q8WU17 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF139Q8WU17 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF139Q8WU17 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RNF139Q8WU17 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RNF139Q8WU17 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RNF139Q8WU17 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF139Q8WU17 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RNF139Q8WU17 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RNF139Q8WU17 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF139Q8WU17 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF139Q8WU17 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RNF139Q8WU17 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF139Q8WU17 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
RNF139Q8WU17 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF139Q8WU17 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.52■■□□□ 1.84
RNF139Q8WU17 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF139Q8WU17 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF139Q8WU17 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF139Q8WU17 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RNF139Q8WU17 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.5■■□□□ 1.83
RNF139Q8WU17 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF139Q8WU17 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF139Q8WU17 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RNF139Q8WU17 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RNF139Q8WU17 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.49■■□□□ 1.83
RNF139Q8WU17 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF139Q8WU17 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF139Q8WU17 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.48■■□□□ 1.83
RNF139Q8WU17 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms