Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RNF139Q8WU17 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RNF139Q8WU17 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.73■■□□□ 1.87
RNF139Q8WU17 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RNF139Q8WU17 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RNF139Q8WU17 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.71■■□□□ 1.87
RNF139Q8WU17 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
RNF139Q8WU17 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RNF139Q8WU17 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RNF139Q8WU17 MIR639-201ENST00000384974 98 ntBASIC26.7■■□□□ 1.86
RNF139Q8WU17 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.7■■□□□ 1.86
RNF139Q8WU17 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF139Q8WU17 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF139Q8WU17 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF139Q8WU17 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF139Q8WU17 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
RNF139Q8WU17 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RNF139Q8WU17 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
RNF139Q8WU17 AC110285.7-201ENST00000624417 1536 ntBASIC26.68■■□□□ 1.86
RNF139Q8WU17 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
RNF139Q8WU17 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.67■■□□□ 1.86
RNF139Q8WU17 AC100797.4-201ENST00000631653 1827 ntBASIC26.67■■□□□ 1.86
RNF139Q8WU17 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.67■■□□□ 1.86
RNF139Q8WU17 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
RNF139Q8WU17 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.65■■□□□ 1.86
RNF139Q8WU17 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.65■■□□□ 1.86
RNF139Q8WU17 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
RNF139Q8WU17 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RNF139Q8WU17 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.65■■□□□ 1.86
RNF139Q8WU17 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RNF139Q8WU17 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF139Q8WU17 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
RNF139Q8WU17 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.63■■□□□ 1.85
RNF139Q8WU17 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
RNF139Q8WU17 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.62■■□□□ 1.85
RNF139Q8WU17 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF139Q8WU17 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.62■■□□□ 1.85
RNF139Q8WU17 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF139Q8WU17 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.61■■□□□ 1.85
RNF139Q8WU17 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
RNF139Q8WU17 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
RNF139Q8WU17 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RNF139Q8WU17 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.6■■□□□ 1.85
RNF139Q8WU17 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.6■■□□□ 1.85
RNF139Q8WU17 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RNF139Q8WU17 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RNF139Q8WU17 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
RNF139Q8WU17 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.59■■□□□ 1.85
RNF139Q8WU17 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RNF139Q8WU17 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RNF139Q8WU17 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
RNF139Q8WU17 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF139Q8WU17 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF139Q8WU17 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RNF139Q8WU17 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF139Q8WU17 DRD5P2-201ENST00000421395 2012 ntBASIC26.56■■□□□ 1.84
RNF139Q8WU17 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.56■■□□□ 1.84
RNF139Q8WU17 MIR4449-201ENST00000578365 66 ntBASIC26.56■■□□□ 1.84
RNF139Q8WU17 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF139Q8WU17 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
RNF139Q8WU17 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF139Q8WU17 AC008813.1-201ENST00000536597 885 ntBASIC26.55■■□□□ 1.84
RNF139Q8WU17 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RNF139Q8WU17 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF139Q8WU17 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
RNF139Q8WU17 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF139Q8WU17 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF139Q8WU17 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RNF139Q8WU17 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RNF139Q8WU17 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RNF139Q8WU17 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF139Q8WU17 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RNF139Q8WU17 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RNF139Q8WU17 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF139Q8WU17 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF139Q8WU17 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
RNF139Q8WU17 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF139Q8WU17 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
RNF139Q8WU17 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF139Q8WU17 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.52■■□□□ 1.84
RNF139Q8WU17 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF139Q8WU17 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF139Q8WU17 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF139Q8WU17 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RNF139Q8WU17 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.5■■□□□ 1.83
RNF139Q8WU17 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF139Q8WU17 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF139Q8WU17 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RNF139Q8WU17 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RNF139Q8WU17 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.49■■□□□ 1.83
RNF139Q8WU17 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF139Q8WU17 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF139Q8WU17 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.48■■□□□ 1.83
RNF139Q8WU17 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms