Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
SSH3Q8TE77 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SSH3Q8TE77 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SSH3Q8TE77 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SSH3Q8TE77 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SSH3Q8TE77 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.72■■■□□ 2.67
SSH3Q8TE77 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.72■■■□□ 2.67
SSH3Q8TE77 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.72■■■□□ 2.67
SSH3Q8TE77 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
SSH3Q8TE77 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.72■■■□□ 2.67
SSH3Q8TE77 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
SSH3Q8TE77 CR559946.2-201ENST00000623684 991 ntBASIC31.71■■■□□ 2.67
SSH3Q8TE77 AC110285.7-201ENST00000624417 1536 ntBASIC31.7■■■□□ 2.67
SSH3Q8TE77 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SSH3Q8TE77 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SSH3Q8TE77 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SSH3Q8TE77 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SSH3Q8TE77 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.69■■■□□ 2.66
SSH3Q8TE77 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
SSH3Q8TE77 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.69■■■□□ 2.66
SSH3Q8TE77 MIR3648-2-201ENST00000581792 180 ntBASIC31.68■■■□□ 2.66
SSH3Q8TE77 MIR3648-1-201ENST00000615959 180 ntBASIC31.68■■■□□ 2.66
SSH3Q8TE77 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SSH3Q8TE77 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SSH3Q8TE77 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SSH3Q8TE77 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.67■■■□□ 2.66
SSH3Q8TE77 PVT1-219ENST00000523427 938 ntTSL 3 BASIC31.67■■■□□ 2.66
SSH3Q8TE77 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
SSH3Q8TE77 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SSH3Q8TE77 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SSH3Q8TE77 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
SSH3Q8TE77 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.65■■■□□ 2.66
SSH3Q8TE77 AP002414.2-202ENST00000590929 1450 ntBASIC31.65■■■□□ 2.66
SSH3Q8TE77 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
SSH3Q8TE77 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.65■■■□□ 2.66
SSH3Q8TE77 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
SSH3Q8TE77 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
SSH3Q8TE77 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.64■■■□□ 2.66
SSH3Q8TE77 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.64■■■□□ 2.66
SSH3Q8TE77 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
SSH3Q8TE77 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
SSH3Q8TE77 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
SSH3Q8TE77 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
SSH3Q8TE77 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.62■■■□□ 2.65
SSH3Q8TE77 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SSH3Q8TE77 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.61■■■□□ 2.65
SSH3Q8TE77 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
SSH3Q8TE77 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SSH3Q8TE77 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
SSH3Q8TE77 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
SSH3Q8TE77 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SSH3Q8TE77 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
SSH3Q8TE77 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SSH3Q8TE77 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
SSH3Q8TE77 AC016575.1-201ENST00000607026 382 ntBASIC31.59■■■□□ 2.65
SSH3Q8TE77 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
SSH3Q8TE77 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
SSH3Q8TE77 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SSH3Q8TE77 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
SSH3Q8TE77 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SSH3Q8TE77 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.56■■■□□ 2.64
SSH3Q8TE77 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
SSH3Q8TE77 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SSH3Q8TE77 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
SSH3Q8TE77 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.55■■■□□ 2.64
SSH3Q8TE77 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
SSH3Q8TE77 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SSH3Q8TE77 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.54■■■□□ 2.64
SSH3Q8TE77 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
SSH3Q8TE77 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
SSH3Q8TE77 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.54■■■□□ 2.64
SSH3Q8TE77 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.52■■■□□ 2.64
SSH3Q8TE77 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
SSH3Q8TE77 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.51■■■□□ 2.63
SSH3Q8TE77 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.51■■■□□ 2.63
SSH3Q8TE77 AC142086.6-201ENST00000621154 1765 ntBASIC31.51■■■□□ 2.63
SSH3Q8TE77 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
SSH3Q8TE77 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
SSH3Q8TE77 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.5■■■□□ 2.63
SSH3Q8TE77 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
SSH3Q8TE77 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SSH3Q8TE77 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SSH3Q8TE77 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
SSH3Q8TE77 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
SSH3Q8TE77 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SSH3Q8TE77 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SSH3Q8TE77 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.49■■■□□ 2.63
SSH3Q8TE77 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SSH3Q8TE77 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.48■■■□□ 2.63
SSH3Q8TE77 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.47■■■□□ 2.63
SSH3Q8TE77 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
SSH3Q8TE77 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.46■■■□□ 2.63
SSH3Q8TE77 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SSH3Q8TE77 MIR639-201ENST00000384974 98 ntBASIC31.45■■■□□ 2.63
SSH3Q8TE77 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.45■■■□□ 2.63
SSH3Q8TE77 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SSH3Q8TE77 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SSH3Q8TE77 AC018358.1-201ENST00000631079 1402 ntBASIC31.43■■■□□ 2.62
SSH3Q8TE77 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
SSH3Q8TE77 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms