Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PHC3Q8NDX5 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PHC3Q8NDX5 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.16■■□□□ 1.62
PHC3Q8NDX5 AC142086.6-201ENST00000621154 1765 ntBASIC25.16■■□□□ 1.62
PHC3Q8NDX5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PHC3Q8NDX5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PHC3Q8NDX5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.16■■□□□ 1.62
PHC3Q8NDX5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.16■■□□□ 1.62
PHC3Q8NDX5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.16■■□□□ 1.62
PHC3Q8NDX5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.16■■□□□ 1.62
PHC3Q8NDX5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PHC3Q8NDX5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.16■■□□□ 1.62
PHC3Q8NDX5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PHC3Q8NDX5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.15■■□□□ 1.62
PHC3Q8NDX5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.15■■□□□ 1.62
PHC3Q8NDX5 AC135983.2-203ENST00000454486 1613 ntBASIC25.15■■□□□ 1.62
PHC3Q8NDX5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
PHC3Q8NDX5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PHC3Q8NDX5 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PHC3Q8NDX5 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PHC3Q8NDX5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.14■■□□□ 1.61
PHC3Q8NDX5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
PHC3Q8NDX5 WHAMMP2-203ENST00000563942 1603 ntBASIC25.14■■□□□ 1.61
PHC3Q8NDX5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PHC3Q8NDX5 AP004833.2-201ENST00000532228 1454 ntBASIC25.13■■□□□ 1.61
PHC3Q8NDX5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.13■■□□□ 1.61
PHC3Q8NDX5 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
PHC3Q8NDX5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PHC3Q8NDX5 LINC01971-201ENST00000617888 1048 ntBASIC25.12■■□□□ 1.61
PHC3Q8NDX5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
PHC3Q8NDX5 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.11■■□□□ 1.61
PHC3Q8NDX5 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.11■■□□□ 1.61
PHC3Q8NDX5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.11■■□□□ 1.61
PHC3Q8NDX5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PHC3Q8NDX5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
PHC3Q8NDX5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
PHC3Q8NDX5 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PHC3Q8NDX5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PHC3Q8NDX5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.09■■□□□ 1.61
PHC3Q8NDX5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PHC3Q8NDX5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PHC3Q8NDX5 DUX4L11-201ENST00000611504 1267 ntBASIC25.09■■□□□ 1.61
PHC3Q8NDX5 DUX4L12-201ENST00000614593 1267 ntBASIC25.09■■□□□ 1.61
PHC3Q8NDX5 DUX4L14-201ENST00000621227 1267 ntBASIC25.09■■□□□ 1.61
PHC3Q8NDX5 AL121749.1-202ENST00000609313 2153 ntBASIC25.09■■□□□ 1.61
PHC3Q8NDX5 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
PHC3Q8NDX5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PHC3Q8NDX5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PHC3Q8NDX5 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
PHC3Q8NDX5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PHC3Q8NDX5 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PHC3Q8NDX5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PHC3Q8NDX5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PHC3Q8NDX5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PHC3Q8NDX5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.06■■□□□ 1.6
PHC3Q8NDX5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PHC3Q8NDX5 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.05■■□□□ 1.6
PHC3Q8NDX5 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
PHC3Q8NDX5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.05■■□□□ 1.6
PHC3Q8NDX5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.05■■□□□ 1.6
PHC3Q8NDX5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.05■■□□□ 1.6
PHC3Q8NDX5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
PHC3Q8NDX5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PHC3Q8NDX5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
PHC3Q8NDX5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
PHC3Q8NDX5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PHC3Q8NDX5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.03■■□□□ 1.6
PHC3Q8NDX5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PHC3Q8NDX5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.03■■□□□ 1.6
PHC3Q8NDX5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PHC3Q8NDX5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PHC3Q8NDX5 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PHC3Q8NDX5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.02■■□□□ 1.6
PHC3Q8NDX5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.02■■□□□ 1.6
PHC3Q8NDX5 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PHC3Q8NDX5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
PHC3Q8NDX5 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PHC3Q8NDX5 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.01■■□□□ 1.59
PHC3Q8NDX5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PHC3Q8NDX5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PHC3Q8NDX5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PHC3Q8NDX5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PHC3Q8NDX5 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
PHC3Q8NDX5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PHC3Q8NDX5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PHC3Q8NDX5 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25■■□□□ 1.59
PHC3Q8NDX5 AC100797.4-201ENST00000631653 1827 ntBASIC25■■□□□ 1.59
PHC3Q8NDX5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PHC3Q8NDX5 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25■■□□□ 1.59
PHC3Q8NDX5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PHC3Q8NDX5 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
PHC3Q8NDX5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.99■■□□□ 1.59
PHC3Q8NDX5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.99■■□□□ 1.59
PHC3Q8NDX5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
PHC3Q8NDX5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.99■■□□□ 1.59
PHC3Q8NDX5 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
PHC3Q8NDX5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
PHC3Q8NDX5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PHC3Q8NDX5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.98■■□□□ 1.59
PHC3Q8NDX5 DUX4L13-201ENST00000554103 1267 ntBASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms