Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNRF1Q8ND25 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNRF1Q8ND25 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNRF1Q8ND25 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNRF1Q8ND25 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ZNRF1Q8ND25 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.24■□□□□ 0.99
ZNRF1Q8ND25 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNRF1Q8ND25 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNRF1Q8ND25 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNRF1Q8ND25 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNRF1Q8ND25 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNRF1Q8ND25 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
ZNRF1Q8ND25 AC142086.6-201ENST00000621154 1765 ntBASIC21.23■□□□□ 0.99
ZNRF1Q8ND25 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNRF1Q8ND25 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNRF1Q8ND25 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNRF1Q8ND25 DUX4L11-201ENST00000611504 1267 ntBASIC21.22■□□□□ 0.99
ZNRF1Q8ND25 DUX4L12-201ENST00000614593 1267 ntBASIC21.22■□□□□ 0.99
ZNRF1Q8ND25 DUX4L14-201ENST00000621227 1267 ntBASIC21.22■□□□□ 0.99
ZNRF1Q8ND25 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNRF1Q8ND25 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNRF1Q8ND25 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNRF1Q8ND25 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNRF1Q8ND25 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.21■□□□□ 0.99
ZNRF1Q8ND25 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNRF1Q8ND25 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
ZNRF1Q8ND25 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNRF1Q8ND25 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.2■□□□□ 0.98
ZNRF1Q8ND25 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.2■□□□□ 0.98
ZNRF1Q8ND25 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNRF1Q8ND25 AC110285.7-201ENST00000624417 1536 ntBASIC21.19■□□□□ 0.98
ZNRF1Q8ND25 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNRF1Q8ND25 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNRF1Q8ND25 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNRF1Q8ND25 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.18■□□□□ 0.98
ZNRF1Q8ND25 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ZNRF1Q8ND25 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNRF1Q8ND25 AP002414.2-202ENST00000590929 1450 ntBASIC21.18■□□□□ 0.98
ZNRF1Q8ND25 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.18■□□□□ 0.98
ZNRF1Q8ND25 DUX4L13-201ENST00000554103 1267 ntBASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 DUX4L15-201ENST00000611059 1267 ntBASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 DUX4L23-201ENST00000615195 1269 ntBASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 DUX4L24-201ENST00000617576 1269 ntBASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 DUX4L22-201ENST00000618238 1269 ntBASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 DUX4L20-201ENST00000619712 1269 ntBASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 DUX4L21-201ENST00000622058 1269 ntBASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 DUX4L10-201ENST00000622460 1267 ntBASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 DUX4L25-201ENST00000624915 1269 ntBASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNRF1Q8ND25 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNRF1Q8ND25 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNRF1Q8ND25 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNRF1Q8ND25 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNRF1Q8ND25 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNRF1Q8ND25 MIR7108-201ENST00000614319 87 ntBASIC21.16■□□□□ 0.98
ZNRF1Q8ND25 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNRF1Q8ND25 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNRF1Q8ND25 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNRF1Q8ND25 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.14■□□□□ 0.97
ZNRF1Q8ND25 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNRF1Q8ND25 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNRF1Q8ND25 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZNRF1Q8ND25 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNRF1Q8ND25 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNRF1Q8ND25 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ZNRF1Q8ND25 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNRF1Q8ND25 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNRF1Q8ND25 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNRF1Q8ND25 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ZNRF1Q8ND25 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNRF1Q8ND25 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNRF1Q8ND25 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ZNRF1Q8ND25 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
ZNRF1Q8ND25 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ZNRF1Q8ND25 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNRF1Q8ND25 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.11■□□□□ 0.97
ZNRF1Q8ND25 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNRF1Q8ND25 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNRF1Q8ND25 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNRF1Q8ND25 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNRF1Q8ND25 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ZNRF1Q8ND25 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNRF1Q8ND25 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ZNRF1Q8ND25 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.1■□□□□ 0.97
ZNRF1Q8ND25 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNRF1Q8ND25 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ZNRF1Q8ND25 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ZNRF1Q8ND25 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNRF1Q8ND25 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNRF1Q8ND25 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ZNRF1Q8ND25 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ZNRF1Q8ND25 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ZNRF1Q8ND25 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNRF1Q8ND25 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNRF1Q8ND25 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms