Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.62■■□□□ 1.21
CNEP1R1Q8N9A8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CNEP1R1Q8N9A8 AP004833.2-201ENST00000532228 1454 ntBASIC22.6■■□□□ 1.21
CNEP1R1Q8N9A8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CNEP1R1Q8N9A8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.6■■□□□ 1.21
CNEP1R1Q8N9A8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CNEP1R1Q8N9A8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CNEP1R1Q8N9A8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CNEP1R1Q8N9A8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CNEP1R1Q8N9A8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CNEP1R1Q8N9A8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.59■■□□□ 1.21
CNEP1R1Q8N9A8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.59■■□□□ 1.21
CNEP1R1Q8N9A8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CNEP1R1Q8N9A8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CNEP1R1Q8N9A8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
CNEP1R1Q8N9A8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CNEP1R1Q8N9A8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CNEP1R1Q8N9A8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.58■■□□□ 1.21
CNEP1R1Q8N9A8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.58■■□□□ 1.2
CNEP1R1Q8N9A8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.58■■□□□ 1.2
CNEP1R1Q8N9A8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.58■■□□□ 1.2
CNEP1R1Q8N9A8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CNEP1R1Q8N9A8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CNEP1R1Q8N9A8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CNEP1R1Q8N9A8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.57■■□□□ 1.2
CNEP1R1Q8N9A8 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
CNEP1R1Q8N9A8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CNEP1R1Q8N9A8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.56■■□□□ 1.2
CNEP1R1Q8N9A8 AC100797.4-201ENST00000631653 1827 ntBASIC22.56■■□□□ 1.2
CNEP1R1Q8N9A8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CNEP1R1Q8N9A8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CNEP1R1Q8N9A8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNEP1R1Q8N9A8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
CNEP1R1Q8N9A8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CNEP1R1Q8N9A8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CNEP1R1Q8N9A8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.55■■□□□ 1.2
CNEP1R1Q8N9A8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CNEP1R1Q8N9A8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.55■■□□□ 1.2
CNEP1R1Q8N9A8 AL139393.2-201ENST00000608721 2025 ntBASIC22.55■■□□□ 1.2
CNEP1R1Q8N9A8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNEP1R1Q8N9A8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CNEP1R1Q8N9A8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNEP1R1Q8N9A8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CNEP1R1Q8N9A8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNEP1R1Q8N9A8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.54■■□□□ 1.2
CNEP1R1Q8N9A8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.54■■□□□ 1.2
CNEP1R1Q8N9A8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.53■■□□□ 1.2
CNEP1R1Q8N9A8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
CNEP1R1Q8N9A8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNEP1R1Q8N9A8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNEP1R1Q8N9A8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNEP1R1Q8N9A8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CNEP1R1Q8N9A8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CNEP1R1Q8N9A8 GPX1-201ENST00000419349 1106 ntBASIC22.52■■□□□ 1.2
CNEP1R1Q8N9A8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CNEP1R1Q8N9A8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.52■■□□□ 1.2
CNEP1R1Q8N9A8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CNEP1R1Q8N9A8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.51■■□□□ 1.19
CNEP1R1Q8N9A8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.51■■□□□ 1.19
CNEP1R1Q8N9A8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CNEP1R1Q8N9A8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.5■■□□□ 1.19
CNEP1R1Q8N9A8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.5■■□□□ 1.19
CNEP1R1Q8N9A8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.5■■□□□ 1.19
CNEP1R1Q8N9A8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CNEP1R1Q8N9A8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.5■■□□□ 1.19
CNEP1R1Q8N9A8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.49■■□□□ 1.19
CNEP1R1Q8N9A8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CNEP1R1Q8N9A8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CNEP1R1Q8N9A8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CNEP1R1Q8N9A8 AC148477.6-201ENST00000623746 465 ntBASIC22.48■■□□□ 1.19
CNEP1R1Q8N9A8 AC022413.1-201ENST00000624602 984 ntBASIC22.48■■□□□ 1.19
CNEP1R1Q8N9A8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CNEP1R1Q8N9A8 ABCB10P3-201ENST00000561950 2166 ntBASIC22.48■■□□□ 1.19
CNEP1R1Q8N9A8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNEP1R1Q8N9A8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNEP1R1Q8N9A8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.47■■□□□ 1.19
CNEP1R1Q8N9A8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.47■■□□□ 1.19
CNEP1R1Q8N9A8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.47■■□□□ 1.19
CNEP1R1Q8N9A8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CNEP1R1Q8N9A8 MIR219A2-201ENST00000608502 1504 ntBASIC22.47■■□□□ 1.19
CNEP1R1Q8N9A8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.46■■□□□ 1.19
CNEP1R1Q8N9A8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CNEP1R1Q8N9A8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CNEP1R1Q8N9A8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CNEP1R1Q8N9A8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CNEP1R1Q8N9A8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.46■■□□□ 1.19
CNEP1R1Q8N9A8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
CNEP1R1Q8N9A8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CNEP1R1Q8N9A8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CNEP1R1Q8N9A8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CNEP1R1Q8N9A8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.44■■□□□ 1.18
CNEP1R1Q8N9A8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CNEP1R1Q8N9A8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CNEP1R1Q8N9A8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.44■■□□□ 1.18
CNEP1R1Q8N9A8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CNEP1R1Q8N9A8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CNEP1R1Q8N9A8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
CNEP1R1Q8N9A8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
CNEP1R1Q8N9A8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CNEP1R1Q8N9A8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms