Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
TRAM1L1Q8N609 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TRAM1L1Q8N609 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRAM1L1Q8N609 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRAM1L1Q8N609 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRAM1L1Q8N609 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.27■■□□□ 1.64
TRAM1L1Q8N609 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRAM1L1Q8N609 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRAM1L1Q8N609 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TRAM1L1Q8N609 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRAM1L1Q8N609 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.27■■□□□ 1.64
TRAM1L1Q8N609 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRAM1L1Q8N609 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TRAM1L1Q8N609 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.26■■□□□ 1.63
TRAM1L1Q8N609 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TRAM1L1Q8N609 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
TRAM1L1Q8N609 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.26■■□□□ 1.63
TRAM1L1Q8N609 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.25■■□□□ 1.63
TRAM1L1Q8N609 HLA-V-202ENST00000446817 847 ntBASIC25.25■■□□□ 1.63
TRAM1L1Q8N609 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
TRAM1L1Q8N609 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
TRAM1L1Q8N609 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TRAM1L1Q8N609 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TRAM1L1Q8N609 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.24■■□□□ 1.63
TRAM1L1Q8N609 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.24■■□□□ 1.63
TRAM1L1Q8N609 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.23■■□□□ 1.63
TRAM1L1Q8N609 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRAM1L1Q8N609 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
TRAM1L1Q8N609 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRAM1L1Q8N609 MIR639-201ENST00000384974 98 ntBASIC25.23■■□□□ 1.63
TRAM1L1Q8N609 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.23■■□□□ 1.63
TRAM1L1Q8N609 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.23■■□□□ 1.63
TRAM1L1Q8N609 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.23■■□□□ 1.63
TRAM1L1Q8N609 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
TRAM1L1Q8N609 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TRAM1L1Q8N609 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TRAM1L1Q8N609 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
TRAM1L1Q8N609 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
TRAM1L1Q8N609 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TRAM1L1Q8N609 AP002414.2-202ENST00000590929 1450 ntBASIC25.21■■□□□ 1.63
TRAM1L1Q8N609 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRAM1L1Q8N609 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRAM1L1Q8N609 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
TRAM1L1Q8N609 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TRAM1L1Q8N609 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.2■■□□□ 1.63
TRAM1L1Q8N609 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRAM1L1Q8N609 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRAM1L1Q8N609 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TRAM1L1Q8N609 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TRAM1L1Q8N609 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TRAM1L1Q8N609 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRAM1L1Q8N609 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TRAM1L1Q8N609 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
TRAM1L1Q8N609 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TRAM1L1Q8N609 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
TRAM1L1Q8N609 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.18■■□□□ 1.62
TRAM1L1Q8N609 AC008813.1-201ENST00000536597 885 ntBASIC25.18■■□□□ 1.62
TRAM1L1Q8N609 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.18■■□□□ 1.62
TRAM1L1Q8N609 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TRAM1L1Q8N609 DRD5P2-201ENST00000421395 2012 ntBASIC25.18■■□□□ 1.62
TRAM1L1Q8N609 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.18■■□□□ 1.62
TRAM1L1Q8N609 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
TRAM1L1Q8N609 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
TRAM1L1Q8N609 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TRAM1L1Q8N609 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TRAM1L1Q8N609 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRAM1L1Q8N609 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRAM1L1Q8N609 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TRAM1L1Q8N609 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
TRAM1L1Q8N609 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TRAM1L1Q8N609 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
TRAM1L1Q8N609 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TRAM1L1Q8N609 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TRAM1L1Q8N609 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TRAM1L1Q8N609 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.12■■□□□ 1.61
TRAM1L1Q8N609 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TRAM1L1Q8N609 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.11■■□□□ 1.61
TRAM1L1Q8N609 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
TRAM1L1Q8N609 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRAM1L1Q8N609 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRAM1L1Q8N609 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRAM1L1Q8N609 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.1■■□□□ 1.61
TRAM1L1Q8N609 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TRAM1L1Q8N609 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRAM1L1Q8N609 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
TRAM1L1Q8N609 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
TRAM1L1Q8N609 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
TRAM1L1Q8N609 MIR4449-201ENST00000578365 66 ntBASIC25.08■■□□□ 1.61
TRAM1L1Q8N609 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
TRAM1L1Q8N609 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.08■■□□□ 1.61
TRAM1L1Q8N609 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRAM1L1Q8N609 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TRAM1L1Q8N609 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.06■■□□□ 1.6
TRAM1L1Q8N609 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRAM1L1Q8N609 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRAM1L1Q8N609 AC148477.6-201ENST00000623746 465 ntBASIC25.06■■□□□ 1.6
TRAM1L1Q8N609 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
TRAM1L1Q8N609 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
TRAM1L1Q8N609 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TRAM1L1Q8N609 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms