Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.2■■□□□ 1.47
ARHGEF39Q8N4T4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.2■■□□□ 1.46
ARHGEF39Q8N4T4 MIR4449-201ENST00000578365 66 ntBASIC24.2■■□□□ 1.46
ARHGEF39Q8N4T4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ARHGEF39Q8N4T4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
ARHGEF39Q8N4T4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
ARHGEF39Q8N4T4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.19■■□□□ 1.46
ARHGEF39Q8N4T4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
ARHGEF39Q8N4T4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
ARHGEF39Q8N4T4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.18■■□□□ 1.46
ARHGEF39Q8N4T4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.18■■□□□ 1.46
ARHGEF39Q8N4T4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.18■■□□□ 1.46
ARHGEF39Q8N4T4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
ARHGEF39Q8N4T4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ARHGEF39Q8N4T4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
ARHGEF39Q8N4T4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
ARHGEF39Q8N4T4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF39Q8N4T4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF39Q8N4T4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF39Q8N4T4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF39Q8N4T4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ARHGEF39Q8N4T4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
ARHGEF39Q8N4T4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
ARHGEF39Q8N4T4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ARHGEF39Q8N4T4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ARHGEF39Q8N4T4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.14■■□□□ 1.45
ARHGEF39Q8N4T4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.14■■□□□ 1.45
ARHGEF39Q8N4T4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ARHGEF39Q8N4T4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ARHGEF39Q8N4T4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ARHGEF39Q8N4T4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
ARHGEF39Q8N4T4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.13■■□□□ 1.45
ARHGEF39Q8N4T4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.13■■□□□ 1.45
ARHGEF39Q8N4T4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ARHGEF39Q8N4T4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ARHGEF39Q8N4T4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
ARHGEF39Q8N4T4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.12■■□□□ 1.45
ARHGEF39Q8N4T4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ARHGEF39Q8N4T4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ARHGEF39Q8N4T4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.11■■□□□ 1.45
ARHGEF39Q8N4T4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ARHGEF39Q8N4T4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.11■■□□□ 1.45
ARHGEF39Q8N4T4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ARHGEF39Q8N4T4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
ARHGEF39Q8N4T4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ARHGEF39Q8N4T4 AC008813.1-201ENST00000536597 885 ntBASIC24.1■■□□□ 1.45
ARHGEF39Q8N4T4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.09■■□□□ 1.45
ARHGEF39Q8N4T4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ARHGEF39Q8N4T4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
ARHGEF39Q8N4T4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
ARHGEF39Q8N4T4 AP002414.2-202ENST00000590929 1450 ntBASIC24.08■■□□□ 1.45
ARHGEF39Q8N4T4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
ARHGEF39Q8N4T4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
ARHGEF39Q8N4T4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
ARHGEF39Q8N4T4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
ARHGEF39Q8N4T4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF39Q8N4T4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF39Q8N4T4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.07■■□□□ 1.44
ARHGEF39Q8N4T4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ARHGEF39Q8N4T4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.06■■□□□ 1.44
ARHGEF39Q8N4T4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.06■■□□□ 1.44
ARHGEF39Q8N4T4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ARHGEF39Q8N4T4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF39Q8N4T4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF39Q8N4T4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.05■■□□□ 1.44
ARHGEF39Q8N4T4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF39Q8N4T4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF39Q8N4T4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ARHGEF39Q8N4T4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF39Q8N4T4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
ARHGEF39Q8N4T4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF39Q8N4T4 DRD5P2-201ENST00000421395 2012 ntBASIC24.03■■□□□ 1.44
ARHGEF39Q8N4T4 AC148477.6-201ENST00000623746 465 ntBASIC24.03■■□□□ 1.44
ARHGEF39Q8N4T4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
ARHGEF39Q8N4T4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
ARHGEF39Q8N4T4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
ARHGEF39Q8N4T4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
ARHGEF39Q8N4T4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.02■■□□□ 1.44
ARHGEF39Q8N4T4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
ARHGEF39Q8N4T4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
ARHGEF39Q8N4T4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.01■■□□□ 1.43
ARHGEF39Q8N4T4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
ARHGEF39Q8N4T4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.01■■□□□ 1.43
ARHGEF39Q8N4T4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
ARHGEF39Q8N4T4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
ARHGEF39Q8N4T4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ARHGEF39Q8N4T4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
ARHGEF39Q8N4T4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ARHGEF39Q8N4T4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
ARHGEF39Q8N4T4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24■■□□□ 1.43
ARHGEF39Q8N4T4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
ARHGEF39Q8N4T4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.99■■□□□ 1.43
ARHGEF39Q8N4T4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ARHGEF39Q8N4T4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
ARHGEF39Q8N4T4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
ARHGEF39Q8N4T4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
ARHGEF39Q8N4T4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
ARHGEF39Q8N4T4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
ARHGEF39Q8N4T4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
ARHGEF39Q8N4T4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms