Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
KRT78Q8N1N4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
KRT78Q8N1N4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.49■■□□□ 1.51
KRT78Q8N1N4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.49■■□□□ 1.51
KRT78Q8N1N4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.49■■□□□ 1.51
KRT78Q8N1N4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
KRT78Q8N1N4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.49■■□□□ 1.51
KRT78Q8N1N4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
KRT78Q8N1N4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
KRT78Q8N1N4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
KRT78Q8N1N4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
KRT78Q8N1N4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
KRT78Q8N1N4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
KRT78Q8N1N4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.47■■□□□ 1.51
KRT78Q8N1N4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
KRT78Q8N1N4 AP002414.2-202ENST00000590929 1450 ntBASIC24.46■■□□□ 1.51
KRT78Q8N1N4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
KRT78Q8N1N4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
KRT78Q8N1N4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KRT78Q8N1N4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
KRT78Q8N1N4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
KRT78Q8N1N4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
KRT78Q8N1N4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.43■■□□□ 1.5
KRT78Q8N1N4 LINC01971-201ENST00000617888 1048 ntBASIC24.42■■□□□ 1.5
KRT78Q8N1N4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
KRT78Q8N1N4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.41■■□□□ 1.5
KRT78Q8N1N4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.4■■□□□ 1.5
KRT78Q8N1N4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
KRT78Q8N1N4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
KRT78Q8N1N4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
KRT78Q8N1N4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
KRT78Q8N1N4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.39■■□□□ 1.49
KRT78Q8N1N4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.39■■□□□ 1.49
KRT78Q8N1N4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
KRT78Q8N1N4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KRT78Q8N1N4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KRT78Q8N1N4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.38■■□□□ 1.49
KRT78Q8N1N4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KRT78Q8N1N4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KRT78Q8N1N4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KRT78Q8N1N4 ZNRF2P2-203ENST00000454624 420 ntBASIC24.37■■□□□ 1.49
KRT78Q8N1N4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.37■■□□□ 1.49
KRT78Q8N1N4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.37■■□□□ 1.49
KRT78Q8N1N4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KRT78Q8N1N4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KRT78Q8N1N4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
KRT78Q8N1N4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.36■■□□□ 1.49
KRT78Q8N1N4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
KRT78Q8N1N4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
KRT78Q8N1N4 AC110285.7-201ENST00000624417 1536 ntBASIC24.35■■□□□ 1.49
KRT78Q8N1N4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
KRT78Q8N1N4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
KRT78Q8N1N4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KRT78Q8N1N4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
KRT78Q8N1N4 ABHD17AP4-201ENST00000411545 909 ntBASIC24.34■■□□□ 1.49
KRT78Q8N1N4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.34■■□□□ 1.49
KRT78Q8N1N4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.33■■□□□ 1.49
KRT78Q8N1N4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
KRT78Q8N1N4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
KRT78Q8N1N4 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
KRT78Q8N1N4 BX255925.1-201ENST00000566954 1854 ntBASIC24.32■■□□□ 1.48
KRT78Q8N1N4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.32■■□□□ 1.48
KRT78Q8N1N4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.32■■□□□ 1.48
KRT78Q8N1N4 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.32■■□□□ 1.48
KRT78Q8N1N4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
KRT78Q8N1N4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
KRT78Q8N1N4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
KRT78Q8N1N4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
KRT78Q8N1N4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
KRT78Q8N1N4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
KRT78Q8N1N4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
KRT78Q8N1N4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
KRT78Q8N1N4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
KRT78Q8N1N4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
KRT78Q8N1N4 LINC01003-201ENST00000564834 1764 ntBASIC24.29■■□□□ 1.48
KRT78Q8N1N4 DUX4L11-201ENST00000611504 1267 ntBASIC24.29■■□□□ 1.48
KRT78Q8N1N4 DUX4L12-201ENST00000614593 1267 ntBASIC24.29■■□□□ 1.48
KRT78Q8N1N4 DUX4L14-201ENST00000621227 1267 ntBASIC24.29■■□□□ 1.48
KRT78Q8N1N4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
KRT78Q8N1N4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
KRT78Q8N1N4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
KRT78Q8N1N4 AC018358.1-201ENST00000631079 1402 ntBASIC24.28■■□□□ 1.48
KRT78Q8N1N4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
KRT78Q8N1N4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
KRT78Q8N1N4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.28■■□□□ 1.48
KRT78Q8N1N4 DUX4L13-201ENST00000554103 1267 ntBASIC24.28■■□□□ 1.48
KRT78Q8N1N4 DUX4L15-201ENST00000611059 1267 ntBASIC24.28■■□□□ 1.48
KRT78Q8N1N4 DUX4L23-201ENST00000615195 1269 ntBASIC24.28■■□□□ 1.48
KRT78Q8N1N4 DUX4L24-201ENST00000617576 1269 ntBASIC24.28■■□□□ 1.48
KRT78Q8N1N4 DUX4L22-201ENST00000618238 1269 ntBASIC24.28■■□□□ 1.48
KRT78Q8N1N4 DUX4L20-201ENST00000619712 1269 ntBASIC24.28■■□□□ 1.48
KRT78Q8N1N4 DUX4L21-201ENST00000622058 1269 ntBASIC24.28■■□□□ 1.48
KRT78Q8N1N4 DUX4L10-201ENST00000622460 1267 ntBASIC24.28■■□□□ 1.48
KRT78Q8N1N4 DUX4L25-201ENST00000624915 1269 ntBASIC24.28■■□□□ 1.48
KRT78Q8N1N4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
KRT78Q8N1N4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
KRT78Q8N1N4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.27■■□□□ 1.48
KRT78Q8N1N4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
KRT78Q8N1N4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
KRT78Q8N1N4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms