Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SIX5Q8N196 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SIX5Q8N196 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC26.26■■□□□ 1.79
SIX5Q8N196 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.26■■□□□ 1.79
SIX5Q8N196 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SIX5Q8N196 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.26■■□□□ 1.79
SIX5Q8N196 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SIX5Q8N196 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
SIX5Q8N196 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.24■■□□□ 1.79
SIX5Q8N196 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SIX5Q8N196 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SIX5Q8N196 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SIX5Q8N196 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SIX5Q8N196 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SIX5Q8N196 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SIX5Q8N196 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SIX5Q8N196 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.23■■□□□ 1.79
SIX5Q8N196 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SIX5Q8N196 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SIX5Q8N196 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.22■■□□□ 1.79
SIX5Q8N196 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.22■■□□□ 1.79
SIX5Q8N196 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SIX5Q8N196 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC26.21■■□□□ 1.79
SIX5Q8N196 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SIX5Q8N196 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
SIX5Q8N196 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.2■■□□□ 1.78
SIX5Q8N196 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SIX5Q8N196 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SIX5Q8N196 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.18■■□□□ 1.78
SIX5Q8N196 DUX4L18-201ENST00000553347 1267 ntBASIC26.18■■□□□ 1.78
SIX5Q8N196 AL035685.1-201ENST00000636663 812 ntBASIC26.18■■□□□ 1.78
SIX5Q8N196 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.18■■□□□ 1.78
SIX5Q8N196 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
SIX5Q8N196 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
SIX5Q8N196 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
SIX5Q8N196 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.17■■□□□ 1.78
SIX5Q8N196 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC26.16■■□□□ 1.78
SIX5Q8N196 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SIX5Q8N196 AC126177.7-201ENST00000547904 679 ntBASIC26.16■■□□□ 1.78
SIX5Q8N196 AC129492.7-201ENST00000622992 756 ntBASIC26.16■■□□□ 1.78
SIX5Q8N196 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
SIX5Q8N196 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SIX5Q8N196 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SIX5Q8N196 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SIX5Q8N196 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SIX5Q8N196 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
SIX5Q8N196 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
SIX5Q8N196 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SIX5Q8N196 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SIX5Q8N196 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
SIX5Q8N196 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SIX5Q8N196 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC26.12■■□□□ 1.77
SIX5Q8N196 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.12■■□□□ 1.77
SIX5Q8N196 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SIX5Q8N196 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.12■■□□□ 1.77
SIX5Q8N196 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
SIX5Q8N196 AL451085.2-201ENST00000605085 799 ntBASIC26.11■■□□□ 1.77
SIX5Q8N196 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.11■■□□□ 1.77
SIX5Q8N196 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
SIX5Q8N196 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SIX5Q8N196 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.1■■□□□ 1.77
SIX5Q8N196 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SIX5Q8N196 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
SIX5Q8N196 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SIX5Q8N196 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SIX5Q8N196 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SIX5Q8N196 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC26.09■■□□□ 1.77
SIX5Q8N196 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.09■■□□□ 1.77
SIX5Q8N196 AL592293.1-201ENST00000502889 1188 ntBASIC26.08■■□□□ 1.77
SIX5Q8N196 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.08■■□□□ 1.77
SIX5Q8N196 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SIX5Q8N196 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SIX5Q8N196 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SIX5Q8N196 AL157400.5-201ENST00000507624 621 ntBASIC26.07■■□□□ 1.76
SIX5Q8N196 AC007029.1-201ENST00000604183 313 ntBASIC26.07■■□□□ 1.76
SIX5Q8N196 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.07■■□□□ 1.76
SIX5Q8N196 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SIX5Q8N196 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.07■■□□□ 1.76
SIX5Q8N196 AC133552.2-201ENST00000619106 1032 ntBASIC26.06■■□□□ 1.76
SIX5Q8N196 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SIX5Q8N196 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
SIX5Q8N196 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SIX5Q8N196 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SIX5Q8N196 AL592295.1-201ENST00000400984 884 ntBASIC26.05■■□□□ 1.76
SIX5Q8N196 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SIX5Q8N196 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SIX5Q8N196 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SIX5Q8N196 AC009831.1-201ENST00000580420 1582 ntBASIC26.04■■□□□ 1.76
SIX5Q8N196 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SIX5Q8N196 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SIX5Q8N196 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SIX5Q8N196 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SIX5Q8N196 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SIX5Q8N196 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.03■■□□□ 1.76
SIX5Q8N196 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
SIX5Q8N196 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
SIX5Q8N196 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SIX5Q8N196 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.02■■□□□ 1.76
SIX5Q8N196 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
SIX5Q8N196 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 1094.9 ms