Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.79■■□□□ 1.88
SYCE1Q8N0S2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
SYCE1Q8N0S2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.79■■□□□ 1.88
SYCE1Q8N0S2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
SYCE1Q8N0S2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.78■■□□□ 1.88
SYCE1Q8N0S2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC26.78■■□□□ 1.88
SYCE1Q8N0S2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.78■■□□□ 1.88
SYCE1Q8N0S2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.78■■□□□ 1.88
SYCE1Q8N0S2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.77■■□□□ 1.88
SYCE1Q8N0S2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SYCE1Q8N0S2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.77■■□□□ 1.88
SYCE1Q8N0S2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
SYCE1Q8N0S2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.76■■□□□ 1.88
SYCE1Q8N0S2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SYCE1Q8N0S2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
SYCE1Q8N0S2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SYCE1Q8N0S2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SYCE1Q8N0S2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.74■■□□□ 1.87
SYCE1Q8N0S2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SYCE1Q8N0S2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.74■■□□□ 1.87
SYCE1Q8N0S2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
SYCE1Q8N0S2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.73■■□□□ 1.87
SYCE1Q8N0S2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
SYCE1Q8N0S2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
SYCE1Q8N0S2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SYCE1Q8N0S2 AC135983.2-203ENST00000454486 1613 ntBASIC26.72■■□□□ 1.87
SYCE1Q8N0S2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SYCE1Q8N0S2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.71■■□□□ 1.87
SYCE1Q8N0S2 AC018358.1-201ENST00000631079 1402 ntBASIC26.71■■□□□ 1.87
SYCE1Q8N0S2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
SYCE1Q8N0S2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.7■■□□□ 1.87
SYCE1Q8N0S2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.87
SYCE1Q8N0S2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SYCE1Q8N0S2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.7■■□□□ 1.86
SYCE1Q8N0S2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
SYCE1Q8N0S2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SYCE1Q8N0S2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SYCE1Q8N0S2 AC005559.1-201ENST00000589661 871 ntBASIC26.69■■□□□ 1.86
SYCE1Q8N0S2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
SYCE1Q8N0S2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SYCE1Q8N0S2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.68■■□□□ 1.86
SYCE1Q8N0S2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SYCE1Q8N0S2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SYCE1Q8N0S2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
SYCE1Q8N0S2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.66■■□□□ 1.86
SYCE1Q8N0S2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SYCE1Q8N0S2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SYCE1Q8N0S2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SYCE1Q8N0S2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SYCE1Q8N0S2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.65■■□□□ 1.86
SYCE1Q8N0S2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.65■■□□□ 1.86
SYCE1Q8N0S2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.65■■□□□ 1.86
SYCE1Q8N0S2 AC108673.1-201ENST00000510422 1159 ntBASIC26.65■■□□□ 1.86
SYCE1Q8N0S2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SYCE1Q8N0S2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SYCE1Q8N0S2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
SYCE1Q8N0S2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
SYCE1Q8N0S2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.64■■□□□ 1.85
SYCE1Q8N0S2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SYCE1Q8N0S2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.63■■□□□ 1.85
SYCE1Q8N0S2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
SYCE1Q8N0S2 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.63■■□□□ 1.85
SYCE1Q8N0S2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SYCE1Q8N0S2 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.63■■□□□ 1.85
SYCE1Q8N0S2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SYCE1Q8N0S2 WHAMMP2-203ENST00000563942 1603 ntBASIC26.62■■□□□ 1.85
SYCE1Q8N0S2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SYCE1Q8N0S2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
SYCE1Q8N0S2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
SYCE1Q8N0S2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.62■■□□□ 1.85
SYCE1Q8N0S2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
SYCE1Q8N0S2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SYCE1Q8N0S2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SYCE1Q8N0S2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SYCE1Q8N0S2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
SYCE1Q8N0S2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SYCE1Q8N0S2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SYCE1Q8N0S2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SYCE1Q8N0S2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SYCE1Q8N0S2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
SYCE1Q8N0S2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SYCE1Q8N0S2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
SYCE1Q8N0S2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SYCE1Q8N0S2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.59■■□□□ 1.85
SYCE1Q8N0S2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
SYCE1Q8N0S2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SYCE1Q8N0S2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SYCE1Q8N0S2 LINC00273-201ENST00000539813 1452 ntBASIC26.58■■□□□ 1.85
SYCE1Q8N0S2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SYCE1Q8N0S2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
SYCE1Q8N0S2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.57■■□□□ 1.84
SYCE1Q8N0S2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
SYCE1Q8N0S2 SUZ12P1-203ENST00000578195 985 ntBASIC26.56■■□□□ 1.84
SYCE1Q8N0S2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
SYCE1Q8N0S2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
SYCE1Q8N0S2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SYCE1Q8N0S2 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.55■■□□□ 1.84
SYCE1Q8N0S2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
SYCE1Q8N0S2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
SYCE1Q8N0S2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms