Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL55Q7Z7F7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL55Q7Z7F7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
MRPL55Q7Z7F7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL55Q7Z7F7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MRPL55Q7Z7F7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 DUX4L28-201ENST00000623687 678 ntBASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MRPL55Q7Z7F7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL55Q7Z7F7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MRPL55Q7Z7F7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.14■□□□□ 0.17
MRPL55Q7Z7F7 AP006261.1-201ENST00000584783 668 ntBASIC16.14■□□□□ 0.17
MRPL55Q7Z7F7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.14■□□□□ 0.17
MRPL55Q7Z7F7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.14■□□□□ 0.17
MRPL55Q7Z7F7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC16.13■□□□□ 0.17
MRPL55Q7Z7F7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MRPL55Q7Z7F7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
MRPL55Q7Z7F7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MRPL55Q7Z7F7 LINC01003-201ENST00000564834 1764 ntBASIC16.12■□□□□ 0.17
MRPL55Q7Z7F7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MRPL55Q7Z7F7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MRPL55Q7Z7F7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
MRPL55Q7Z7F7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
MRPL55Q7Z7F7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPL55Q7Z7F7 MIR6090-201ENST00000622481 60 ntBASIC16.11■□□□□ 0.17
MRPL55Q7Z7F7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MRPL55Q7Z7F7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 AP002414.2-202ENST00000590929 1450 ntBASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 AC135983.2-203ENST00000454486 1613 ntBASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MRPL55Q7Z7F7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 AL121749.1-202ENST00000609313 2153 ntBASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MRPL55Q7Z7F7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MRPL55Q7Z7F7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC16.08■□□□□ 0.17
MRPL55Q7Z7F7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.08■□□□□ 0.17
MRPL55Q7Z7F7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.08■□□□□ 0.16
MRPL55Q7Z7F7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 LINC00273-201ENST00000539813 1452 ntBASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
MRPL55Q7Z7F7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MRPL55Q7Z7F7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC16.06■□□□□ 0.16
MRPL55Q7Z7F7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL55Q7Z7F7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.06■□□□□ 0.16
MRPL55Q7Z7F7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL55Q7Z7F7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MRPL55Q7Z7F7 WHAMMP2-203ENST00000563942 1603 ntBASIC16.05■□□□□ 0.16
MRPL55Q7Z7F7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MRPL55Q7Z7F7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MRPL55Q7Z7F7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MRPL55Q7Z7F7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL55Q7Z7F7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL55Q7Z7F7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL55Q7Z7F7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC16.03■□□□□ 0.16
MRPL55Q7Z7F7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL55Q7Z7F7 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MRPL55Q7Z7F7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL55Q7Z7F7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL55Q7Z7F7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL55Q7Z7F7 AC044849.2-201ENST00000606596 710 ntBASIC16.02■□□□□ 0.16
MRPL55Q7Z7F7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MRPL55Q7Z7F7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.02■□□□□ 0.15
MRPL55Q7Z7F7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.02■□□□□ 0.15
MRPL55Q7Z7F7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms