Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF44Q7L0R7 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
RNF44Q7L0R7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF44Q7L0R7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
RNF44Q7L0R7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF44Q7L0R7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF44Q7L0R7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.38■■□□□ 1.49
RNF44Q7L0R7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF44Q7L0R7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF44Q7L0R7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF44Q7L0R7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF44Q7L0R7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
RNF44Q7L0R7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF44Q7L0R7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF44Q7L0R7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF44Q7L0R7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF44Q7L0R7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF44Q7L0R7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF44Q7L0R7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.34■■□□□ 1.49
RNF44Q7L0R7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF44Q7L0R7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
RNF44Q7L0R7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF44Q7L0R7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF44Q7L0R7 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.33■■□□□ 1.49
RNF44Q7L0R7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF44Q7L0R7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF44Q7L0R7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
RNF44Q7L0R7 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
RNF44Q7L0R7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF44Q7L0R7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF44Q7L0R7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RNF44Q7L0R7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
RNF44Q7L0R7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 AC139426.1-201ENST00000568218 2529 ntBASIC24.31■■□□□ 1.48
RNF44Q7L0R7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF44Q7L0R7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNF44Q7L0R7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF44Q7L0R7 MIR4449-201ENST00000578365 66 ntBASIC24.3■■□□□ 1.48
RNF44Q7L0R7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF44Q7L0R7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 AC008813.1-201ENST00000536597 885 ntBASIC24.29■■□□□ 1.48
RNF44Q7L0R7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.29■■□□□ 1.48
RNF44Q7L0R7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF44Q7L0R7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF44Q7L0R7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF44Q7L0R7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.28■■□□□ 1.48
RNF44Q7L0R7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.28■■□□□ 1.48
RNF44Q7L0R7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
RNF44Q7L0R7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RNF44Q7L0R7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNF44Q7L0R7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNF44Q7L0R7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF44Q7L0R7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF44Q7L0R7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
RNF44Q7L0R7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.26■■□□□ 1.47
RNF44Q7L0R7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RNF44Q7L0R7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.25■■□□□ 1.47
RNF44Q7L0R7 AP002414.2-202ENST00000590929 1450 ntBASIC24.25■■□□□ 1.47
RNF44Q7L0R7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF44Q7L0R7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF44Q7L0R7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF44Q7L0R7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF44Q7L0R7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF44Q7L0R7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF44Q7L0R7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RNF44Q7L0R7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.21■■□□□ 1.47
RNF44Q7L0R7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
RNF44Q7L0R7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
RNF44Q7L0R7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.2■■□□□ 1.46
RNF44Q7L0R7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RNF44Q7L0R7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF44Q7L0R7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RNF44Q7L0R7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
RNF44Q7L0R7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF44Q7L0R7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
RNF44Q7L0R7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.18■■□□□ 1.46
RNF44Q7L0R7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF44Q7L0R7 AC148477.6-201ENST00000623746 465 ntBASIC24.18■■□□□ 1.46
RNF44Q7L0R7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RNF44Q7L0R7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.17■■□□□ 1.46
RNF44Q7L0R7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RNF44Q7L0R7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms