Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
DCLRE1AQ6PJP8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.39■■□□□ 1.98
DCLRE1AQ6PJP8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
DCLRE1AQ6PJP8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.97
DCLRE1AQ6PJP8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.97
DCLRE1AQ6PJP8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
DCLRE1AQ6PJP8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
DCLRE1AQ6PJP8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
DCLRE1AQ6PJP8 GPX1-201ENST00000419349 1106 ntBASIC27.37■■□□□ 1.97
DCLRE1AQ6PJP8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
DCLRE1AQ6PJP8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
DCLRE1AQ6PJP8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
DCLRE1AQ6PJP8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
DCLRE1AQ6PJP8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
DCLRE1AQ6PJP8 AC148477.6-201ENST00000623746 465 ntBASIC27.36■■□□□ 1.97
DCLRE1AQ6PJP8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.35■■□□□ 1.97
DCLRE1AQ6PJP8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
DCLRE1AQ6PJP8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
DCLRE1AQ6PJP8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
DCLRE1AQ6PJP8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
DCLRE1AQ6PJP8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
DCLRE1AQ6PJP8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.34■■□□□ 1.97
DCLRE1AQ6PJP8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC27.34■■□□□ 1.97
DCLRE1AQ6PJP8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.34■■□□□ 1.97
DCLRE1AQ6PJP8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.34■■□□□ 1.97
DCLRE1AQ6PJP8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
DCLRE1AQ6PJP8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
DCLRE1AQ6PJP8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
DCLRE1AQ6PJP8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC27.33■■□□□ 1.97
DCLRE1AQ6PJP8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC27.33■■□□□ 1.97
DCLRE1AQ6PJP8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
DCLRE1AQ6PJP8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.32■■□□□ 1.96
DCLRE1AQ6PJP8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.32■■□□□ 1.96
DCLRE1AQ6PJP8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
DCLRE1AQ6PJP8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
DCLRE1AQ6PJP8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
DCLRE1AQ6PJP8 AC022413.1-201ENST00000624602 984 ntBASIC27.29■■□□□ 1.96
DCLRE1AQ6PJP8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
DCLRE1AQ6PJP8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.29■■□□□ 1.96
DCLRE1AQ6PJP8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
DCLRE1AQ6PJP8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
DCLRE1AQ6PJP8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
DCLRE1AQ6PJP8 AC100797.4-201ENST00000631653 1827 ntBASIC27.27■■□□□ 1.96
DCLRE1AQ6PJP8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC27.27■■□□□ 1.96
DCLRE1AQ6PJP8 RNF126P1-201ENST00000567452 1320 ntBASIC27.27■■□□□ 1.96
DCLRE1AQ6PJP8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.27■■□□□ 1.96
DCLRE1AQ6PJP8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.26■■□□□ 1.96
DCLRE1AQ6PJP8 MIR219A2-201ENST00000608502 1504 ntBASIC27.26■■□□□ 1.96
DCLRE1AQ6PJP8 AL139393.2-201ENST00000608721 2025 ntBASIC27.26■■□□□ 1.95
DCLRE1AQ6PJP8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
DCLRE1AQ6PJP8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
DCLRE1AQ6PJP8 RARRES2P2-201ENST00000394842 485 ntBASIC27.25■■□□□ 1.95
DCLRE1AQ6PJP8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.25■■□□□ 1.95
DCLRE1AQ6PJP8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
DCLRE1AQ6PJP8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
DCLRE1AQ6PJP8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
DCLRE1AQ6PJP8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
DCLRE1AQ6PJP8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.24■■□□□ 1.95
DCLRE1AQ6PJP8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.24■■□□□ 1.95
DCLRE1AQ6PJP8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.24■■□□□ 1.95
DCLRE1AQ6PJP8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
DCLRE1AQ6PJP8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
DCLRE1AQ6PJP8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
DCLRE1AQ6PJP8 ABCB10P1-201ENST00000614297 2181 ntBASIC27.24■■□□□ 1.95
DCLRE1AQ6PJP8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
DCLRE1AQ6PJP8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
DCLRE1AQ6PJP8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
DCLRE1AQ6PJP8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.23■■□□□ 1.95
DCLRE1AQ6PJP8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
DCLRE1AQ6PJP8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
DCLRE1AQ6PJP8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
DCLRE1AQ6PJP8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
DCLRE1AQ6PJP8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
DCLRE1AQ6PJP8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
DCLRE1AQ6PJP8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC27.21■■□□□ 1.95
DCLRE1AQ6PJP8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
DCLRE1AQ6PJP8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.21■■□□□ 1.95
DCLRE1AQ6PJP8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
DCLRE1AQ6PJP8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
DCLRE1AQ6PJP8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.2■■□□□ 1.94
DCLRE1AQ6PJP8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
DCLRE1AQ6PJP8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.2■■□□□ 1.94
DCLRE1AQ6PJP8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC27.19■■□□□ 1.94
DCLRE1AQ6PJP8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
DCLRE1AQ6PJP8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.19■■□□□ 1.94
DCLRE1AQ6PJP8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
DCLRE1AQ6PJP8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
DCLRE1AQ6PJP8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
DCLRE1AQ6PJP8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
DCLRE1AQ6PJP8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
DCLRE1AQ6PJP8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
DCLRE1AQ6PJP8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
DCLRE1AQ6PJP8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.15■■□□□ 1.94
DCLRE1AQ6PJP8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
DCLRE1AQ6PJP8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
DCLRE1AQ6PJP8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.14■■□□□ 1.94
DCLRE1AQ6PJP8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.14■■□□□ 1.94
DCLRE1AQ6PJP8 AC060814.1-201ENST00000554326 538 ntBASIC27.14■■□□□ 1.94
DCLRE1AQ6PJP8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
DCLRE1AQ6PJP8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms