Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.35■■■□□ 2.45
CTR9Q6PD62 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CTR9Q6PD62 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CTR9Q6PD62 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
CTR9Q6PD62 ABCB10P3-201ENST00000561950 2166 ntBASIC30.34■■■□□ 2.45
CTR9Q6PD62 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.33■■■□□ 2.45
CTR9Q6PD62 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
CTR9Q6PD62 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CTR9Q6PD62 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
CTR9Q6PD62 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
CTR9Q6PD62 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
CTR9Q6PD62 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
CTR9Q6PD62 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.3■■■□□ 2.44
CTR9Q6PD62 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CTR9Q6PD62 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
CTR9Q6PD62 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
CTR9Q6PD62 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CTR9Q6PD62 AC008813.1-201ENST00000536597 885 ntBASIC30.29■■■□□ 2.44
CTR9Q6PD62 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
CTR9Q6PD62 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.29■■■□□ 2.44
CTR9Q6PD62 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.28■■■□□ 2.44
CTR9Q6PD62 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CTR9Q6PD62 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.27■■■□□ 2.44
CTR9Q6PD62 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.27■■■□□ 2.44
CTR9Q6PD62 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CTR9Q6PD62 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.27■■■□□ 2.44
CTR9Q6PD62 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
CTR9Q6PD62 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.44
CTR9Q6PD62 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CTR9Q6PD62 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CTR9Q6PD62 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.26■■■□□ 2.43
CTR9Q6PD62 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.25■■■□□ 2.43
CTR9Q6PD62 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CTR9Q6PD62 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CTR9Q6PD62 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CTR9Q6PD62 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.25■■■□□ 2.43
CTR9Q6PD62 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CTR9Q6PD62 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CTR9Q6PD62 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CTR9Q6PD62 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CTR9Q6PD62 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CTR9Q6PD62 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CTR9Q6PD62 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
CTR9Q6PD62 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.24■■■□□ 2.43
CTR9Q6PD62 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.24■■■□□ 2.43
CTR9Q6PD62 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CTR9Q6PD62 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.23■■■□□ 2.43
CTR9Q6PD62 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CTR9Q6PD62 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.23■■■□□ 2.43
CTR9Q6PD62 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.23■■■□□ 2.43
CTR9Q6PD62 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CTR9Q6PD62 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
CTR9Q6PD62 AC139426.1-201ENST00000568218 2529 ntBASIC30.22■■■□□ 2.43
CTR9Q6PD62 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.21■■■□□ 2.43
CTR9Q6PD62 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.21■■■□□ 2.43
CTR9Q6PD62 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CTR9Q6PD62 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.2■■■□□ 2.43
CTR9Q6PD62 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
CTR9Q6PD62 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.19■■■□□ 2.42
CTR9Q6PD62 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CTR9Q6PD62 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CTR9Q6PD62 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
CTR9Q6PD62 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.18■■■□□ 2.42
CTR9Q6PD62 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
CTR9Q6PD62 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
CTR9Q6PD62 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
CTR9Q6PD62 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.17■■■□□ 2.42
CTR9Q6PD62 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.16■■■□□ 2.42
CTR9Q6PD62 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
CTR9Q6PD62 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
CTR9Q6PD62 AC148477.6-201ENST00000623746 465 ntBASIC30.15■■■□□ 2.42
CTR9Q6PD62 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.14■■■□□ 2.42
CTR9Q6PD62 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
CTR9Q6PD62 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CTR9Q6PD62 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.14■■■□□ 2.42
CTR9Q6PD62 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CTR9Q6PD62 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CTR9Q6PD62 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.13■■■□□ 2.41
CTR9Q6PD62 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CTR9Q6PD62 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CTR9Q6PD62 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CTR9Q6PD62 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CTR9Q6PD62 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.12■■■□□ 2.41
CTR9Q6PD62 HSD17B1P1-201ENST00000590052 955 ntBASIC30.12■■■□□ 2.41
CTR9Q6PD62 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CTR9Q6PD62 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.12■■■□□ 2.41
CTR9Q6PD62 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.11■■■□□ 2.41
CTR9Q6PD62 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
CTR9Q6PD62 MIR219A2-201ENST00000608502 1504 ntBASIC30.11■■■□□ 2.41
CTR9Q6PD62 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CTR9Q6PD62 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CTR9Q6PD62 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.1■■■□□ 2.41
CTR9Q6PD62 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.1■■■□□ 2.41
CTR9Q6PD62 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.1■■■□□ 2.41
CTR9Q6PD62 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CTR9Q6PD62 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CTR9Q6PD62 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CTR9Q6PD62 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CTR9Q6PD62 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.08■■■□□ 2.41
CTR9Q6PD62 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms