Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC26.88■■□□□ 1.89
PTCRAQ6ISU1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PTCRAQ6ISU1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
PTCRAQ6ISU1 AC135983.2-203ENST00000454486 1613 ntBASIC26.87■■□□□ 1.89
PTCRAQ6ISU1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
PTCRAQ6ISU1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.87■■□□□ 1.89
PTCRAQ6ISU1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.87■■□□□ 1.89
PTCRAQ6ISU1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
PTCRAQ6ISU1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.87■■□□□ 1.89
PTCRAQ6ISU1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCRAQ6ISU1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
PTCRAQ6ISU1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
PTCRAQ6ISU1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
PTCRAQ6ISU1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
PTCRAQ6ISU1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PTCRAQ6ISU1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.84■■□□□ 1.89
PTCRAQ6ISU1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PTCRAQ6ISU1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.89
PTCRAQ6ISU1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.83■■□□□ 1.89
PTCRAQ6ISU1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC26.83■■□□□ 1.89
PTCRAQ6ISU1 AL161658.1-201ENST00000623641 1967 ntBASIC26.82■■□□□ 1.88
PTCRAQ6ISU1 AL592293.1-201ENST00000502889 1188 ntBASIC26.82■■□□□ 1.88
PTCRAQ6ISU1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PTCRAQ6ISU1 AC126177.7-201ENST00000547904 679 ntBASIC26.81■■□□□ 1.88
PTCRAQ6ISU1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTCRAQ6ISU1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTCRAQ6ISU1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTCRAQ6ISU1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTCRAQ6ISU1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC26.8■■□□□ 1.88
PTCRAQ6ISU1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
PTCRAQ6ISU1 AC131212.1-201ENST00000613771 668 ntBASIC26.8■■□□□ 1.88
PTCRAQ6ISU1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.79■■□□□ 1.88
PTCRAQ6ISU1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.79■■□□□ 1.88
PTCRAQ6ISU1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTCRAQ6ISU1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
PTCRAQ6ISU1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PTCRAQ6ISU1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.78■■□□□ 1.88
PTCRAQ6ISU1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PTCRAQ6ISU1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PTCRAQ6ISU1 AC007029.1-201ENST00000604183 313 ntBASIC26.77■■□□□ 1.88
PTCRAQ6ISU1 AC133552.2-201ENST00000619106 1032 ntBASIC26.77■■□□□ 1.88
PTCRAQ6ISU1 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.76■■□□□ 1.88
PTCRAQ6ISU1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PTCRAQ6ISU1 AC127502.1-201ENST00000399971 1502 ntBASIC26.76■■□□□ 1.87
PTCRAQ6ISU1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PTCRAQ6ISU1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.76■■□□□ 1.87
PTCRAQ6ISU1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PTCRAQ6ISU1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PTCRAQ6ISU1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PTCRAQ6ISU1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.75■■□□□ 1.87
PTCRAQ6ISU1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PTCRAQ6ISU1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PTCRAQ6ISU1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.75■■□□□ 1.87
PTCRAQ6ISU1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
PTCRAQ6ISU1 AC009831.1-201ENST00000580420 1582 ntBASIC26.75■■□□□ 1.87
PTCRAQ6ISU1 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PTCRAQ6ISU1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.73■■□□□ 1.87
PTCRAQ6ISU1 AL157400.5-201ENST00000507624 621 ntBASIC26.72■■□□□ 1.87
PTCRAQ6ISU1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
PTCRAQ6ISU1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PTCRAQ6ISU1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PTCRAQ6ISU1 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PTCRAQ6ISU1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PTCRAQ6ISU1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.71■■□□□ 1.87
PTCRAQ6ISU1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.71■■□□□ 1.87
PTCRAQ6ISU1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.7■■□□□ 1.87
PTCRAQ6ISU1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PTCRAQ6ISU1 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.7■■□□□ 1.86
PTCRAQ6ISU1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PTCRAQ6ISU1 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.7■■□□□ 1.86
PTCRAQ6ISU1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.7■■□□□ 1.86
PTCRAQ6ISU1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PTCRAQ6ISU1 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.69■■□□□ 1.86
PTCRAQ6ISU1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
PTCRAQ6ISU1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.69■■□□□ 1.86
PTCRAQ6ISU1 AC009299.2-201ENST00000482477 511 ntBASIC26.69■■□□□ 1.86
PTCRAQ6ISU1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.68■■□□□ 1.86
PTCRAQ6ISU1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.68■■□□□ 1.86
PTCRAQ6ISU1 THA1P-201ENST00000590384 1145 ntBASIC26.68■■□□□ 1.86
PTCRAQ6ISU1 BHLHE23-202ENST00000612929 1109 ntBASIC26.68■■□□□ 1.86
PTCRAQ6ISU1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PTCRAQ6ISU1 KRT8P33-201ENST00000508125 1423 ntBASIC26.67■■□□□ 1.86
PTCRAQ6ISU1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PTCRAQ6ISU1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PTCRAQ6ISU1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
PTCRAQ6ISU1 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.66■■□□□ 1.86
PTCRAQ6ISU1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC26.65■■□□□ 1.86
PTCRAQ6ISU1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PTCRAQ6ISU1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PTCRAQ6ISU1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PTCRAQ6ISU1 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.64■■□□□ 1.86
PTCRAQ6ISU1 RP9P-202ENST00000450133 1212 ntBASIC26.64■■□□□ 1.86
PTCRAQ6ISU1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
PTCRAQ6ISU1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.64■■□□□ 1.86
PTCRAQ6ISU1 AC010980.1-201ENST00000587192 1142 ntBASIC26.64■■□□□ 1.86
PTCRAQ6ISU1 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
PTCRAQ6ISU1 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PTCRAQ6ISU1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.63■■□□□ 1.85
PTCRAQ6ISU1 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PTCRAQ6ISU1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms