Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
TTC39AQ5SRH9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
TTC39AQ5SRH9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
TTC39AQ5SRH9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
TTC39AQ5SRH9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
TTC39AQ5SRH9 AC139426.1-201ENST00000568218 2529 ntBASIC31.06■■■□□ 2.56
TTC39AQ5SRH9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
TTC39AQ5SRH9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
TTC39AQ5SRH9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TTC39AQ5SRH9 AC008813.1-201ENST00000536597 885 ntBASIC31.06■■■□□ 2.56
TTC39AQ5SRH9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TTC39AQ5SRH9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TTC39AQ5SRH9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
TTC39AQ5SRH9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.05■■■□□ 2.56
TTC39AQ5SRH9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
TTC39AQ5SRH9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
TTC39AQ5SRH9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TTC39AQ5SRH9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
TTC39AQ5SRH9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.02■■■□□ 2.56
TTC39AQ5SRH9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
TTC39AQ5SRH9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
TTC39AQ5SRH9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.01■■■□□ 2.55
TTC39AQ5SRH9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
TTC39AQ5SRH9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
TTC39AQ5SRH9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
TTC39AQ5SRH9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.01■■■□□ 2.55
TTC39AQ5SRH9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.01■■■□□ 2.55
TTC39AQ5SRH9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31■■■□□ 2.55
TTC39AQ5SRH9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TTC39AQ5SRH9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TTC39AQ5SRH9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
TTC39AQ5SRH9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.97■■■□□ 2.55
TTC39AQ5SRH9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
TTC39AQ5SRH9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.96■■■□□ 2.55
TTC39AQ5SRH9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
TTC39AQ5SRH9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
TTC39AQ5SRH9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
TTC39AQ5SRH9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.95■■■□□ 2.55
TTC39AQ5SRH9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.95■■■□□ 2.55
TTC39AQ5SRH9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
TTC39AQ5SRH9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.95■■■□□ 2.54
TTC39AQ5SRH9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TTC39AQ5SRH9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
TTC39AQ5SRH9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
TTC39AQ5SRH9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.9■■■□□ 2.54
TTC39AQ5SRH9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TTC39AQ5SRH9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.9■■■□□ 2.54
TTC39AQ5SRH9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
TTC39AQ5SRH9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
TTC39AQ5SRH9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
TTC39AQ5SRH9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TTC39AQ5SRH9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TTC39AQ5SRH9 AC148477.6-201ENST00000623746 465 ntBASIC30.89■■■□□ 2.54
TTC39AQ5SRH9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
TTC39AQ5SRH9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TTC39AQ5SRH9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.88■■■□□ 2.53
TTC39AQ5SRH9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TTC39AQ5SRH9 AP002414.2-202ENST00000590929 1450 ntBASIC30.88■■■□□ 2.53
TTC39AQ5SRH9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TTC39AQ5SRH9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
TTC39AQ5SRH9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.87■■■□□ 2.53
TTC39AQ5SRH9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TTC39AQ5SRH9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.86■■■□□ 2.53
TTC39AQ5SRH9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 MIR219A2-201ENST00000608502 1504 ntBASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms