Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
USH1GQ495M9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
USH1GQ495M9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
USH1GQ495M9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
USH1GQ495M9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
USH1GQ495M9 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
USH1GQ495M9 AC008813.1-201ENST00000536597 885 ntBASIC29.38■■■□□ 2.29
USH1GQ495M9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.37■■■□□ 2.29
USH1GQ495M9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.37■■■□□ 2.29
USH1GQ495M9 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
USH1GQ495M9 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
USH1GQ495M9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
USH1GQ495M9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
USH1GQ495M9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.35■■■□□ 2.29
USH1GQ495M9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
USH1GQ495M9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
USH1GQ495M9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
USH1GQ495M9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
USH1GQ495M9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
USH1GQ495M9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
USH1GQ495M9 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
USH1GQ495M9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.34■■■□□ 2.29
USH1GQ495M9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.34■■■□□ 2.29
USH1GQ495M9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
USH1GQ495M9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.33■■■□□ 2.29
USH1GQ495M9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.33■■■□□ 2.29
USH1GQ495M9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
USH1GQ495M9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC29.33■■■□□ 2.29
USH1GQ495M9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.33■■■□□ 2.29
USH1GQ495M9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
USH1GQ495M9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
USH1GQ495M9 ABCB10P3-201ENST00000561950 2166 ntBASIC29.32■■■□□ 2.28
USH1GQ495M9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.31■■■□□ 2.28
USH1GQ495M9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.31■■■□□ 2.28
USH1GQ495M9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.31■■■□□ 2.28
USH1GQ495M9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
USH1GQ495M9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
USH1GQ495M9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
USH1GQ495M9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.3■■■□□ 2.28
USH1GQ495M9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
USH1GQ495M9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
USH1GQ495M9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.29■■■□□ 2.28
USH1GQ495M9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
USH1GQ495M9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.28■■■□□ 2.28
USH1GQ495M9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
USH1GQ495M9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.28■■■□□ 2.28
USH1GQ495M9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.28■■■□□ 2.28
USH1GQ495M9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC29.28■■■□□ 2.28
USH1GQ495M9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
USH1GQ495M9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
USH1GQ495M9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
USH1GQ495M9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
USH1GQ495M9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
USH1GQ495M9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
USH1GQ495M9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.26■■■□□ 2.27
USH1GQ495M9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
USH1GQ495M9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
USH1GQ495M9 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.25■■■□□ 2.27
USH1GQ495M9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
USH1GQ495M9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.23■■■□□ 2.27
USH1GQ495M9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
USH1GQ495M9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.22■■■□□ 2.27
USH1GQ495M9 GPX1-201ENST00000419349 1106 ntBASIC29.22■■■□□ 2.27
USH1GQ495M9 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
USH1GQ495M9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.22■■■□□ 2.27
USH1GQ495M9 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.22■■■□□ 2.27
USH1GQ495M9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.22■■■□□ 2.27
USH1GQ495M9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.21■■■□□ 2.27
USH1GQ495M9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.21■■■□□ 2.27
USH1GQ495M9 AC148477.6-201ENST00000623746 465 ntBASIC29.21■■■□□ 2.27
USH1GQ495M9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.21■■■□□ 2.27
USH1GQ495M9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.21■■■□□ 2.27
USH1GQ495M9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
USH1GQ495M9 MIR219A2-201ENST00000608502 1504 ntBASIC29.2■■■□□ 2.27
USH1GQ495M9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
USH1GQ495M9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
USH1GQ495M9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.2■■■□□ 2.26
USH1GQ495M9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.19■■■□□ 2.26
USH1GQ495M9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
USH1GQ495M9 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
USH1GQ495M9 AC139426.1-201ENST00000568218 2529 ntBASIC29.18■■■□□ 2.26
USH1GQ495M9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
USH1GQ495M9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.17■■■□□ 2.26
USH1GQ495M9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
USH1GQ495M9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.17■■■□□ 2.26
USH1GQ495M9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
USH1GQ495M9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
USH1GQ495M9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
USH1GQ495M9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC29.15■■■□□ 2.26
USH1GQ495M9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.15■■■□□ 2.26
USH1GQ495M9 AC022413.1-201ENST00000624602 984 ntBASIC29.15■■■□□ 2.26
USH1GQ495M9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
USH1GQ495M9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
USH1GQ495M9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
USH1GQ495M9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC29.13■■■□□ 2.25
USH1GQ495M9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC29.13■■■□□ 2.25
USH1GQ495M9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
USH1GQ495M9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC29.13■■■□□ 2.25
USH1GQ495M9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
USH1GQ495M9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 199 ms