Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 SPE4YLR146C 903 nt8.59□□□□□ -1.03
SSL2Q00578 AOS1YPR180W 1044 nt8.59□□□□□ -1.03
SSL2Q00578 RRT14YIL127C 621 nt8.58□□□□□ -1.04
SSL2Q00578 ERV25YML012W 636 nt8.58□□□□□ -1.04
SSL2Q00578 RPS6AYPL090C 711 nt8.58□□□□□ -1.04
SSL2Q00578 RPS6BYBR181C 711 nt8.58□□□□□ -1.04
SSL2Q00578 YKR018CYKR018C 2178 nt8.58□□□□□ -1.04
SSL2Q00578 GNP1YDR508C 1992 nt8.57□□□□□ -1.04
SSL2Q00578 TOP3YLR234W 1971 nt8.57□□□□□ -1.04
SSL2Q00578 TOM71YHR117W 1920 nt8.57□□□□□ -1.04
SSL2Q00578 HAM1YJR069C 594 nt8.57□□□□□ -1.04
SSL2Q00578 YJR154WYJR154W 1041 nt8.57□□□□□ -1.04
SSL2Q00578 SWM1YDR260C 513 nt8.56□□□□□ -1.04
SSL2Q00578 PAU19YMR325W 375 nt8.56□□□□□ -1.04
SSL2Q00578 RCF2YNR018W 675 nt8.56□□□□□ -1.04
SSL2Q00578 YGR137WYGR137W 375 nt8.55□□□□□ -1.04
SSL2Q00578 SEN2YLR105C 1134 nt8.55□□□□□ -1.04
SSL2Q00578 YJL160CYJL160C 864 nt8.54□□□□□ -1.04
SSL2Q00578 FCY1YPR062W 477 nt8.54□□□□□ -1.04
SSL2Q00578 LEO1YOR123C 1395 nt8.53□□□□□ -1.04
SSL2Q00578 MET8YBR213W 825 nt8.52□□□□□ -1.05
SSL2Q00578 HNM1YGL077C 1692 nt8.52□□□□□ -1.05
SSL2Q00578 YER156CYER156C 1017 nt8.51□□□□□ -1.05
SSL2Q00578 PRE10YOR362C 867 nt8.51□□□□□ -1.05
SSL2Q00578 UTR5YEL035C 501 nt8.5□□□□□ -1.05
SSL2Q00578 YPT31YER031C 672 nt8.5□□□□□ -1.05
SSL2Q00578 PMA2YPL036W 2844 nt8.5□□□□□ -1.05
SSL2Q00578 YMR253CYMR253C 1245 nt8.49□□□□□ -1.05
SSL2Q00578 ARG7YMR062C 1326 nt8.49□□□□□ -1.05
SSL2Q00578 ERG6YML008C 1152 nt8.48□□□□□ -1.05
SSL2Q00578 ATP2YJR121W 1536 nt8.48□□□□□ -1.05
SSL2Q00578 SEC24YIL109C 2781 nt8.48□□□□□ -1.05
SSL2Q00578 YOR041CYOR041C 432 nt8.47□□□□□ -1.05
SSL2Q00578 YDR215CYDR215C 414 nt8.46□□□□□ -1.06
SSL2Q00578 YJL043WYJL043W 774 nt8.46□□□□□ -1.06
SSL2Q00578 TCB1YOR086C 3561 nt8.46□□□□□ -1.06
SSL2Q00578 ERR3YMR323W 1314 nt8.46□□□□□ -1.06
SSL2Q00578 ERR1YOR393W 1314 nt8.46□□□□□ -1.06
SSL2Q00578 ERR2YPL281C 1314 nt8.46□□□□□ -1.06
SSL2Q00578 RMD8YFR048W 1989 nt8.46□□□□□ -1.06
SSL2Q00578 CPR2YHR057C 618 nt8.45□□□□□ -1.06
SSL2Q00578 MAL31YBR298C 1845 nt8.45□□□□□ -1.06
SSL2Q00578 CKI1YLR133W 1749 nt8.44□□□□□ -1.06
SSL2Q00578 DCR2YLR361C 1737 nt8.44□□□□□ -1.06
SSL2Q00578 MNN9YPL050C 1188 nt8.44□□□□□ -1.06
SSL2Q00578 FRA1YLL029W 2250 nt8.43□□□□□ -1.06
SSL2Q00578 GNA1YFL017C 480 nt8.43□□□□□ -1.06
SSL2Q00578 ATP10YLR393W 840 nt8.43□□□□□ -1.06
SSL2Q00578 NAP1YKR048C 1254 nt8.42□□□□□ -1.06
SSL2Q00578 APT1YML022W 564 nt8.42□□□□□ -1.06
SSL2Q00578 SAM50YNL026W 1455 nt8.42□□□□□ -1.06
SSL2Q00578 PRB1YEL060C 1908 nt8.41□□□□□ -1.06
SSL2Q00578 YER152W-AYER152W-A 567 nt8.4□□□□□ -1.06
SSL2Q00578 YHR033WYHR033W 1272 nt8.4□□□□□ -1.06
SSL2Q00578 YIL168WYIL168W 384 nt8.4□□□□□ -1.06
SSL2Q00578 YPC1YBR183W 951 nt8.4□□□□□ -1.06
SSL2Q00578 FLC2YAL053W 2352 nt8.4□□□□□ -1.07
SSL2Q00578 STE3YKL178C 1413 nt8.39□□□□□ -1.07
SSL2Q00578 CDC23YHR166C 1881 nt8.39□□□□□ -1.07
SSL2Q00578 AFG2YLR397C 2343 nt8.39□□□□□ -1.07
SSL2Q00578 TPI1YDR050C 747 nt8.38□□□□□ -1.07
SSL2Q00578 YER137CYER137C 447 nt8.38□□□□□ -1.07
SSL2Q00578 DAL80YKR034W 810 nt8.38□□□□□ -1.07
SSL2Q00578 SLG1YOR008C 1137 nt8.38□□□□□ -1.07
SSL2Q00578 PUP1YOR157C 786 nt8.38□□□□□ -1.07
SSL2Q00578 YRF1-3YGR296W 5580 nt8.38□□□□□ -1.07
SSL2Q00578 YRF1-6YNL339C 5580 nt8.38□□□□□ -1.07
SSL2Q00578 YRF1-7YPL283C 5580 nt8.38□□□□□ -1.07
SSL2Q00578 FRT1YOR324C 1809 nt8.38□□□□□ -1.07
SSL2Q00578 YNL295WYNL295W 1575 nt8.37□□□□□ -1.07
SSL2Q00578 PMU1YKL128C 888 nt8.37□□□□□ -1.07
SSL2Q00578 PET10YKR046C 852 nt8.37□□□□□ -1.07
SSL2Q00578 AQR1YNL065W 1761 nt8.36□□□□□ -1.07
SSL2Q00578 TOD6YBL054W 1578 nt8.35□□□□□ -1.07
SSL2Q00578 POB3YML069W 1659 nt8.35□□□□□ -1.07
SSL2Q00578 CAR2YLR438W 1275 nt8.35□□□□□ -1.07
SSL2Q00578 YML034C-AYML034C-A 399 nt8.35□□□□□ -1.07
SSL2Q00578 RPL12BYDR418W 498 nt8.34□□□□□ -1.07
SSL2Q00578 YGL260WYGL260W 231 nt8.34□□□□□ -1.07
SSL2Q00578 YMR206WYMR206W 942 nt8.34□□□□□ -1.07
SSL2Q00578 ATO2YNR002C 849 nt8.34□□□□□ -1.07
SSL2Q00578 PAU21YOR394W 495 nt8.34□□□□□ -1.07
SSL2Q00578 PAU22YPL282C 495 nt8.34□□□□□ -1.07
SSL2Q00578 ENB1YOL158C 1821 nt8.33□□□□□ -1.08
SSL2Q00578 BNA3YJL060W 1335 nt8.32□□□□□ -1.08
SSL2Q00578 SNF7YLR025W 723 nt8.32□□□□□ -1.08
SSL2Q00578 NUP84YDL116W 2181 nt8.32□□□□□ -1.08
SSL2Q00578 YPR084WYPR084W 1371 nt8.32□□□□□ -1.08
SSL2Q00578 GGC1YDL198C 903 nt8.31□□□□□ -1.08
SSL2Q00578 NSG2YNL156C 900 nt8.31□□□□□ -1.08
SSL2Q00578 YIL177CYIL177C 5277 nt8.31□□□□□ -1.08
SSL2Q00578 BDS1YOL164W 1941 nt8.31□□□□□ -1.08
SSL2Q00578 YCP4YCR004C 744 nt8.3□□□□□ -1.08
SSL2Q00578 MSS51YLR203C 1311 nt8.29□□□□□ -1.08
SSL2Q00578 ARO7YPR060C 771 nt8.29□□□□□ -1.08
SSL2Q00578 EXG2YDR261C 1689 nt8.29□□□□□ -1.08
SSL2Q00578 BAP3YDR046C 1815 nt8.29□□□□□ -1.08
SSL2Q00578 RRP43YCR035C 1185 nt8.28□□□□□ -1.08
SSL2Q00578 GTS1YGL181W 1191 nt8.28□□□□□ -1.08
SSL2Q00578 AFG3YER017C 2286 nt8.28□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms