Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SMIM11AP58511 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMIM11AP58511 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.31■■□□□ 1.32
SMIM11AP58511 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.31■■□□□ 1.32
SMIM11AP58511 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.31■■□□□ 1.32
SMIM11AP58511 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.31■■□□□ 1.32
SMIM11AP58511 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
SMIM11AP58511 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.31■■□□□ 1.32
SMIM11AP58511 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.31■■□□□ 1.32
SMIM11AP58511 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
SMIM11AP58511 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMIM11AP58511 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMIM11AP58511 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
SMIM11AP58511 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.3■■□□□ 1.32
SMIM11AP58511 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SMIM11AP58511 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
SMIM11AP58511 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.29■■□□□ 1.32
SMIM11AP58511 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.29■■□□□ 1.32
SMIM11AP58511 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.29■■□□□ 1.32
SMIM11AP58511 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
SMIM11AP58511 MIR762-201ENST00000390236 83 ntBASIC23.28■■□□□ 1.32
SMIM11AP58511 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.28■■□□□ 1.32
SMIM11AP58511 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
SMIM11AP58511 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SMIM11AP58511 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.27■■□□□ 1.32
SMIM11AP58511 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.27■■□□□ 1.32
SMIM11AP58511 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SMIM11AP58511 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
SMIM11AP58511 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMIM11AP58511 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SMIM11AP58511 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.25■■□□□ 1.31
SMIM11AP58511 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMIM11AP58511 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.24■■□□□ 1.31
SMIM11AP58511 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMIM11AP58511 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMIM11AP58511 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMIM11AP58511 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
SMIM11AP58511 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.23■■□□□ 1.31
SMIM11AP58511 AC018358.1-201ENST00000631079 1402 ntBASIC23.23■■□□□ 1.31
SMIM11AP58511 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMIM11AP58511 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.22■■□□□ 1.31
SMIM11AP58511 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMIM11AP58511 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMIM11AP58511 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.2■■□□□ 1.3
SMIM11AP58511 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMIM11AP58511 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.2■■□□□ 1.3
SMIM11AP58511 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.2■■□□□ 1.3
SMIM11AP58511 AC135983.2-203ENST00000454486 1613 ntBASIC23.19■■□□□ 1.3
SMIM11AP58511 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMIM11AP58511 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SMIM11AP58511 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SMIM11AP58511 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMIM11AP58511 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.18■■□□□ 1.3
SMIM11AP58511 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.18■■□□□ 1.3
SMIM11AP58511 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SMIM11AP58511 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
SMIM11AP58511 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SMIM11AP58511 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SMIM11AP58511 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.16■■□□□ 1.3
SMIM11AP58511 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SMIM11AP58511 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.16■■□□□ 1.3
SMIM11AP58511 AC108673.1-201ENST00000510422 1159 ntBASIC23.16■■□□□ 1.3
SMIM11AP58511 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMIM11AP58511 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.16■■□□□ 1.3
SMIM11AP58511 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SMIM11AP58511 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SMIM11AP58511 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
SMIM11AP58511 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SMIM11AP58511 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SMIM11AP58511 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.15■■□□□ 1.3
SMIM11AP58511 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
SMIM11AP58511 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SMIM11AP58511 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.14■■□□□ 1.29
SMIM11AP58511 AC005559.1-201ENST00000589661 871 ntBASIC23.14■■□□□ 1.29
SMIM11AP58511 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SMIM11AP58511 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.14■■□□□ 1.29
SMIM11AP58511 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SMIM11AP58511 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMIM11AP58511 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMIM11AP58511 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMIM11AP58511 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMIM11AP58511 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
SMIM11AP58511 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMIM11AP58511 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
SMIM11AP58511 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SMIM11AP58511 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMIM11AP58511 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SMIM11AP58511 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SMIM11AP58511 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMIM11AP58511 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
SMIM11AP58511 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SMIM11AP58511 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SMIM11AP58511 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SMIM11AP58511 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.11■■□□□ 1.29
SMIM11AP58511 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMIM11AP58511 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMIM11AP58511 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMIM11AP58511 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.1■■□□□ 1.29
SMIM11AP58511 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMIM11AP58511 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms