Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 GUK1-208ENST00000366728 842 ntTSL 2 BASIC32.59■■■□□ 2.81
RFC4P35249 ECEL1P2-201ENST00000461596 1295 ntBASIC32.59■■■□□ 2.81
RFC4P35249 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RFC4P35249 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.58■■■□□ 2.81
RFC4P35249 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.58■■■□□ 2.81
RFC4P35249 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
RFC4P35249 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RFC4P35249 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RFC4P35249 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
RFC4P35249 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC32.57■■■□□ 2.8
RFC4P35249 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
RFC4P35249 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC32.57■■■□□ 2.8
RFC4P35249 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
RFC4P35249 RARRES2P1-201ENST00000474487 481 ntBASIC32.56■■■□□ 2.8
RFC4P35249 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
RFC4P35249 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
RFC4P35249 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
RFC4P35249 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC32.55■■■□□ 2.8
RFC4P35249 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
RFC4P35249 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
RFC4P35249 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.54■■■□□ 2.8
RFC4P35249 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.53■■■□□ 2.8
RFC4P35249 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.53■■■□□ 2.8
RFC4P35249 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RFC4P35249 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
RFC4P35249 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
RFC4P35249 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
RFC4P35249 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
RFC4P35249 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
RFC4P35249 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
RFC4P35249 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
RFC4P35249 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
RFC4P35249 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC32.49■■■□□ 2.79
RFC4P35249 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
RFC4P35249 AC126177.7-201ENST00000547904 679 ntBASIC32.48■■■□□ 2.79
RFC4P35249 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
RFC4P35249 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
RFC4P35249 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RFC4P35249 AL135925.1-201ENST00000605920 1701 ntBASIC32.46■■■□□ 2.79
RFC4P35249 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC32.46■■■□□ 2.79
RFC4P35249 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RFC4P35249 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RFC4P35249 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC32.46■■■□□ 2.79
RFC4P35249 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.79
RFC4P35249 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
RFC4P35249 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
RFC4P35249 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RFC4P35249 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RFC4P35249 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.44■■■□□ 2.78
RFC4P35249 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RFC4P35249 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC32.43■■■□□ 2.78
RFC4P35249 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
RFC4P35249 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
RFC4P35249 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC32.43■■■□□ 2.78
RFC4P35249 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.43■■■□□ 2.78
RFC4P35249 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
RFC4P35249 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
RFC4P35249 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RFC4P35249 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC32.41■■■□□ 2.78
RFC4P35249 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.41■■■□□ 2.78
RFC4P35249 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.41■■■□□ 2.78
RFC4P35249 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
RFC4P35249 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.41■■■□□ 2.78
RFC4P35249 MEST-211ENST00000437945 1455 ntTSL 5 BASIC32.4■■■□□ 2.78
RFC4P35249 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
RFC4P35249 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RFC4P35249 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
RFC4P35249 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC32.38■■■□□ 2.77
RFC4P35249 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC32.38■■■□□ 2.77
RFC4P35249 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
RFC4P35249 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RFC4P35249 AL157400.5-201ENST00000507624 621 ntBASIC32.35■■■□□ 2.77
RFC4P35249 AC129492.7-201ENST00000622992 756 ntBASIC32.35■■■□□ 2.77
RFC4P35249 HES4-204ENST00000484667 667 ntTSL 3 BASIC32.34■■■□□ 2.77
RFC4P35249 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC32.34■■■□□ 2.77
RFC4P35249 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC32.34■■■□□ 2.77
RFC4P35249 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RFC4P35249 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
RFC4P35249 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC32.33■■■□□ 2.77
RFC4P35249 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
RFC4P35249 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
RFC4P35249 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.32■■■□□ 2.77
RFC4P35249 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC32.32■■■□□ 2.76
RFC4P35249 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
RFC4P35249 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RFC4P35249 DUX4L18-201ENST00000553347 1267 ntBASIC32.31■■■□□ 2.76
RFC4P35249 AC007029.1-201ENST00000604183 313 ntBASIC32.31■■■□□ 2.76
RFC4P35249 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RFC4P35249 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RFC4P35249 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
RFC4P35249 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RFC4P35249 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.3■■■□□ 2.76
RFC4P35249 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
RFC4P35249 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC32.3■■■□□ 2.76
RFC4P35249 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
RFC4P35249 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RFC4P35249 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RFC4P35249 AL592293.1-201ENST00000502889 1188 ntBASIC32.28■■■□□ 2.76
RFC4P35249 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
RFC4P35249 AC133552.2-201ENST00000619106 1032 ntBASIC32.27■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms