Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 GUK1-208ENST00000366728 842 ntTSL 2 BASIC32.59■■■□□ 2.81
RFC4P35249 ECEL1P2-201ENST00000461596 1295 ntBASIC32.59■■■□□ 2.81
RFC4P35249 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RFC4P35249 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.58■■■□□ 2.81
RFC4P35249 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC32.58■■■□□ 2.81
RFC4P35249 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
RFC4P35249 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RFC4P35249 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RFC4P35249 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
RFC4P35249 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC32.57■■■□□ 2.8
RFC4P35249 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
RFC4P35249 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC32.57■■■□□ 2.8
RFC4P35249 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
RFC4P35249 RARRES2P1-201ENST00000474487 481 ntBASIC32.56■■■□□ 2.8
RFC4P35249 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
RFC4P35249 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
RFC4P35249 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
RFC4P35249 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC32.55■■■□□ 2.8
RFC4P35249 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.54■■■□□ 2.8
RFC4P35249 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
RFC4P35249 PEX7-203ENST00000541292 945 ntTSL 5 BASIC32.54■■■□□ 2.8
RFC4P35249 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.53■■■□□ 2.8
RFC4P35249 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.53■■■□□ 2.8
RFC4P35249 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
RFC4P35249 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
RFC4P35249 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.52■■■□□ 2.8
RFC4P35249 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
RFC4P35249 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
RFC4P35249 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
RFC4P35249 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
RFC4P35249 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
RFC4P35249 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
RFC4P35249 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC32.49■■■□□ 2.79
RFC4P35249 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
RFC4P35249 AC126177.7-201ENST00000547904 679 ntBASIC32.48■■■□□ 2.79
RFC4P35249 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC32.47■■■□□ 2.79
RFC4P35249 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
RFC4P35249 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RFC4P35249 AL135925.1-201ENST00000605920 1701 ntBASIC32.46■■■□□ 2.79
RFC4P35249 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC32.46■■■□□ 2.79
RFC4P35249 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RFC4P35249 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RFC4P35249 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC32.46■■■□□ 2.79
RFC4P35249 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.79
RFC4P35249 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
RFC4P35249 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
RFC4P35249 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RFC4P35249 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RFC4P35249 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.44■■■□□ 2.78
RFC4P35249 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
RFC4P35249 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC32.43■■■□□ 2.78
RFC4P35249 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
RFC4P35249 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
RFC4P35249 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC32.43■■■□□ 2.78
RFC4P35249 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.43■■■□□ 2.78
RFC4P35249 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC32.42■■■□□ 2.78
RFC4P35249 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
RFC4P35249 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
RFC4P35249 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC32.41■■■□□ 2.78
RFC4P35249 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.41■■■□□ 2.78
RFC4P35249 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.41■■■□□ 2.78
RFC4P35249 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
RFC4P35249 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.41■■■□□ 2.78
RFC4P35249 MEST-211ENST00000437945 1455 ntTSL 5 BASIC32.4■■■□□ 2.78
RFC4P35249 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
RFC4P35249 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
RFC4P35249 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
RFC4P35249 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC32.38■■■□□ 2.77
RFC4P35249 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC32.38■■■□□ 2.77
RFC4P35249 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
RFC4P35249 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
RFC4P35249 AL157400.5-201ENST00000507624 621 ntBASIC32.35■■■□□ 2.77
RFC4P35249 AC129492.7-201ENST00000622992 756 ntBASIC32.35■■■□□ 2.77
RFC4P35249 HES4-204ENST00000484667 667 ntTSL 3 BASIC32.34■■■□□ 2.77
RFC4P35249 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC32.34■■■□□ 2.77
RFC4P35249 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC32.34■■■□□ 2.77
RFC4P35249 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RFC4P35249 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
RFC4P35249 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC32.33■■■□□ 2.77
RFC4P35249 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC32.33■■■□□ 2.77
RFC4P35249 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
RFC4P35249 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.32■■■□□ 2.77
RFC4P35249 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC32.32■■■□□ 2.76
RFC4P35249 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
RFC4P35249 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RFC4P35249 DUX4L18-201ENST00000553347 1267 ntBASIC32.31■■■□□ 2.76
RFC4P35249 AC007029.1-201ENST00000604183 313 ntBASIC32.31■■■□□ 2.76
RFC4P35249 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
RFC4P35249 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
RFC4P35249 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
RFC4P35249 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
RFC4P35249 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.3■■■□□ 2.76
RFC4P35249 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
RFC4P35249 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC32.3■■■□□ 2.76
RFC4P35249 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
RFC4P35249 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RFC4P35249 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
RFC4P35249 AL592293.1-201ENST00000502889 1188 ntBASIC32.28■■■□□ 2.76
RFC4P35249 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
RFC4P35249 AC133552.2-201ENST00000619106 1032 ntBASIC32.27■■■□□ 2.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms