Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PEPDP12955 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PEPDP12955 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.31■■□□□ 1.32
PEPDP12955 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PEPDP12955 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.31■■□□□ 1.32
PEPDP12955 AP004833.2-201ENST00000532228 1454 ntBASIC23.3■■□□□ 1.32
PEPDP12955 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PEPDP12955 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PEPDP12955 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PEPDP12955 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.3■■□□□ 1.32
PEPDP12955 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.3■■□□□ 1.32
PEPDP12955 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PEPDP12955 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PEPDP12955 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.29■■□□□ 1.32
PEPDP12955 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.29■■□□□ 1.32
PEPDP12955 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PEPDP12955 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.28■■□□□ 1.32
PEPDP12955 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.28■■□□□ 1.32
PEPDP12955 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.28■■□□□ 1.32
PEPDP12955 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PEPDP12955 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PEPDP12955 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.27■■□□□ 1.32
PEPDP12955 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PEPDP12955 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
PEPDP12955 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.31
PEPDP12955 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PEPDP12955 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.26■■□□□ 1.31
PEPDP12955 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PEPDP12955 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PEPDP12955 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.25■■□□□ 1.31
PEPDP12955 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.25■■□□□ 1.31
PEPDP12955 AC135983.2-203ENST00000454486 1613 ntBASIC23.25■■□□□ 1.31
PEPDP12955 WHAMMP2-203ENST00000563942 1603 ntBASIC23.25■■□□□ 1.31
PEPDP12955 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PEPDP12955 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
PEPDP12955 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PEPDP12955 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PEPDP12955 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.24■■□□□ 1.31
PEPDP12955 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PEPDP12955 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PEPDP12955 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PEPDP12955 DUX4L13-201ENST00000554103 1267 ntBASIC23.23■■□□□ 1.31
PEPDP12955 DUX4L15-201ENST00000611059 1267 ntBASIC23.23■■□□□ 1.31
PEPDP12955 DUX4L23-201ENST00000615195 1269 ntBASIC23.23■■□□□ 1.31
PEPDP12955 DUX4L24-201ENST00000617576 1269 ntBASIC23.23■■□□□ 1.31
PEPDP12955 DUX4L22-201ENST00000618238 1269 ntBASIC23.23■■□□□ 1.31
PEPDP12955 DUX4L20-201ENST00000619712 1269 ntBASIC23.23■■□□□ 1.31
PEPDP12955 DUX4L21-201ENST00000622058 1269 ntBASIC23.23■■□□□ 1.31
PEPDP12955 DUX4L10-201ENST00000622460 1267 ntBASIC23.23■■□□□ 1.31
PEPDP12955 DUX4L25-201ENST00000624915 1269 ntBASIC23.23■■□□□ 1.31
PEPDP12955 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PEPDP12955 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PEPDP12955 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PEPDP12955 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PEPDP12955 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PEPDP12955 HLA-V-202ENST00000446817 847 ntBASIC23.22■■□□□ 1.31
PEPDP12955 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PEPDP12955 MIR3648-2-201ENST00000581792 180 ntBASIC23.21■■□□□ 1.31
PEPDP12955 MIR3648-1-201ENST00000615959 180 ntBASIC23.21■■□□□ 1.31
PEPDP12955 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.21■■□□□ 1.31
PEPDP12955 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.21■■□□□ 1.31
PEPDP12955 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PEPDP12955 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PEPDP12955 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.21■■□□□ 1.31
PEPDP12955 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PEPDP12955 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PEPDP12955 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PEPDP12955 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.2■■□□□ 1.3
PEPDP12955 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
PEPDP12955 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PEPDP12955 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PEPDP12955 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.2■■□□□ 1.3
PEPDP12955 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PEPDP12955 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PEPDP12955 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PEPDP12955 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.19■■□□□ 1.3
PEPDP12955 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PEPDP12955 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.18■■□□□ 1.3
PEPDP12955 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PEPDP12955 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.18■■□□□ 1.3
PEPDP12955 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.18■■□□□ 1.3
PEPDP12955 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
PEPDP12955 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PEPDP12955 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PEPDP12955 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PEPDP12955 CR559946.2-201ENST00000623684 991 ntBASIC23.17■■□□□ 1.3
PEPDP12955 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PEPDP12955 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.17■■□□□ 1.3
PEPDP12955 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PEPDP12955 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PEPDP12955 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PEPDP12955 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PEPDP12955 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
PEPDP12955 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PEPDP12955 AC016575.1-201ENST00000607026 382 ntBASIC23.16■■□□□ 1.3
PEPDP12955 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PEPDP12955 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PEPDP12955 AC100797.4-201ENST00000631653 1827 ntBASIC23.15■■□□□ 1.3
PEPDP12955 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PEPDP12955 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms