Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.04■□□□□ 0.8
PF4V1P10720 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PF4V1P10720 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PF4V1P10720 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.03■□□□□ 0.8
PF4V1P10720 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PF4V1P10720 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PF4V1P10720 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.02■□□□□ 0.8
PF4V1P10720 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.02■□□□□ 0.8
PF4V1P10720 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.02■□□□□ 0.8
PF4V1P10720 ABCB10P3-201ENST00000561950 2166 ntBASIC20.02■□□□□ 0.8
PF4V1P10720 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
PF4V1P10720 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PF4V1P10720 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.01■□□□□ 0.79
PF4V1P10720 AC139426.1-201ENST00000568218 2529 ntBASIC20.01■□□□□ 0.79
PF4V1P10720 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PF4V1P10720 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PF4V1P10720 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20■□□□□ 0.79
PF4V1P10720 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20■□□□□ 0.79
PF4V1P10720 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PF4V1P10720 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20■□□□□ 0.79
PF4V1P10720 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PF4V1P10720 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.99■□□□□ 0.79
PF4V1P10720 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PF4V1P10720 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.99■□□□□ 0.79
PF4V1P10720 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PF4V1P10720 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PF4V1P10720 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.99■□□□□ 0.79
PF4V1P10720 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PF4V1P10720 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.98■□□□□ 0.79
PF4V1P10720 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PF4V1P10720 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PF4V1P10720 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PF4V1P10720 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PF4V1P10720 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.97■□□□□ 0.79
PF4V1P10720 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PF4V1P10720 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PF4V1P10720 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PF4V1P10720 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.95■□□□□ 0.78
PF4V1P10720 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PF4V1P10720 AC100797.4-201ENST00000631653 1827 ntBASIC19.95■□□□□ 0.78
PF4V1P10720 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PF4V1P10720 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PF4V1P10720 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.95■□□□□ 0.78
PF4V1P10720 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PF4V1P10720 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.94■□□□□ 0.78
PF4V1P10720 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.94■□□□□ 0.78
PF4V1P10720 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PF4V1P10720 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PF4V1P10720 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.93■□□□□ 0.78
PF4V1P10720 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PF4V1P10720 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.93■□□□□ 0.78
PF4V1P10720 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PF4V1P10720 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.93■□□□□ 0.78
PF4V1P10720 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PF4V1P10720 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PF4V1P10720 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.93■□□□□ 0.78
PF4V1P10720 AC110285.7-201ENST00000624417 1536 ntBASIC19.92■□□□□ 0.78
PF4V1P10720 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PF4V1P10720 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PF4V1P10720 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.92■□□□□ 0.78
PF4V1P10720 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.92■□□□□ 0.78
PF4V1P10720 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.92■□□□□ 0.78
PF4V1P10720 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PF4V1P10720 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC19.92■□□□□ 0.78
PF4V1P10720 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PF4V1P10720 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.91■□□□□ 0.78
PF4V1P10720 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PF4V1P10720 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PF4V1P10720 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PF4V1P10720 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PF4V1P10720 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PF4V1P10720 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.91■□□□□ 0.78
PF4V1P10720 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PF4V1P10720 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PF4V1P10720 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.9■□□□□ 0.78
PF4V1P10720 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PF4V1P10720 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PF4V1P10720 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
PF4V1P10720 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.88■□□□□ 0.77
PF4V1P10720 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PF4V1P10720 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.88■□□□□ 0.77
PF4V1P10720 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PF4V1P10720 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
PF4V1P10720 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.87■□□□□ 0.77
PF4V1P10720 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PF4V1P10720 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.86■□□□□ 0.77
PF4V1P10720 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms