Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
COL5A2P05997 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC34.35■■■■□ 3.09
COL5A2P05997 RARRES2P1-201ENST00000474487 481 ntBASIC34.35■■■■□ 3.09
COL5A2P05997 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
COL5A2P05997 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC34.34■■■■□ 3.09
COL5A2P05997 GUK1-208ENST00000366728 842 ntTSL 2 BASIC34.33■■■■□ 3.09
COL5A2P05997 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC34.33■■■■□ 3.09
COL5A2P05997 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
COL5A2P05997 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC34.33■■■■□ 3.09
COL5A2P05997 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC34.33■■■■□ 3.09
COL5A2P05997 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC34.33■■■■□ 3.09
COL5A2P05997 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.08
COL5A2P05997 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
COL5A2P05997 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
COL5A2P05997 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
COL5A2P05997 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
COL5A2P05997 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
COL5A2P05997 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
COL5A2P05997 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
COL5A2P05997 AL157400.5-201ENST00000507624 621 ntBASIC34.3■■■■□ 3.08
COL5A2P05997 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
COL5A2P05997 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
COL5A2P05997 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC34.29■■■■□ 3.08
COL5A2P05997 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
COL5A2P05997 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
COL5A2P05997 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
COL5A2P05997 ECEL1P2-201ENST00000461596 1295 ntBASIC34.28■■■■□ 3.08
COL5A2P05997 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC34.28■■■■□ 3.08
COL5A2P05997 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
COL5A2P05997 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
COL5A2P05997 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
COL5A2P05997 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC34.26■■■■□ 3.07
COL5A2P05997 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC34.26■■■■□ 3.07
COL5A2P05997 MED25-210ENST00000612854 801 ntTSL 5 BASIC34.26■■■■□ 3.07
COL5A2P05997 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
COL5A2P05997 MED25-214ENST00000622402 642 ntTSL 5 BASIC34.26■■■■□ 3.07
COL5A2P05997 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
COL5A2P05997 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
COL5A2P05997 MOB2-207ENST00000614710 705 ntTSL 5 BASIC34.25■■■■□ 3.07
COL5A2P05997 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
COL5A2P05997 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC34.23■■■■□ 3.07
COL5A2P05997 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC34.23■■■■□ 3.07
COL5A2P05997 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
COL5A2P05997 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
COL5A2P05997 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
COL5A2P05997 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC34.2■■■■□ 3.07
COL5A2P05997 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC34.2■■■■□ 3.07
COL5A2P05997 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
COL5A2P05997 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC34.2■■■■□ 3.07
COL5A2P05997 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC34.2■■■■□ 3.06
COL5A2P05997 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC34.2■■■■□ 3.06
COL5A2P05997 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC34.18■■■■□ 3.06
COL5A2P05997 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
COL5A2P05997 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC34.17■■■■□ 3.06
COL5A2P05997 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC34.16■■■■□ 3.06
COL5A2P05997 AL135925.1-201ENST00000605920 1701 ntBASIC34.16■■■■□ 3.06
COL5A2P05997 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC34.15■■■■□ 3.06
COL5A2P05997 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC34.15■■■■□ 3.06
COL5A2P05997 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC34.14■■■■□ 3.06
COL5A2P05997 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC34.14■■■■□ 3.06
COL5A2P05997 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC34.13■■■■□ 3.05
COL5A2P05997 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC34.12■■■■□ 3.05
COL5A2P05997 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
COL5A2P05997 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
COL5A2P05997 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
COL5A2P05997 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
COL5A2P05997 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC34.11■■■■□ 3.05
COL5A2P05997 AC007029.1-201ENST00000604183 313 ntBASIC34.11■■■■□ 3.05
COL5A2P05997 AC129492.7-201ENST00000622992 756 ntBASIC34.11■■■■□ 3.05
COL5A2P05997 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
COL5A2P05997 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC34.1■■■■□ 3.05
COL5A2P05997 AC126177.7-201ENST00000547904 679 ntBASIC34.1■■■■□ 3.05
COL5A2P05997 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC34.1■■■■□ 3.05
COL5A2P05997 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC34.1■■■■□ 3.05
COL5A2P05997 MEST-211ENST00000437945 1455 ntTSL 5 BASIC34.09■■■■□ 3.05
COL5A2P05997 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC34.07■■■■□ 3.05
COL5A2P05997 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
COL5A2P05997 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC34.07■■■■□ 3.05
COL5A2P05997 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
COL5A2P05997 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC34.07■■■■□ 3.04
COL5A2P05997 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
COL5A2P05997 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
COL5A2P05997 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
COL5A2P05997 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
COL5A2P05997 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
COL5A2P05997 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
COL5A2P05997 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC34.04■■■■□ 3.04
COL5A2P05997 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
COL5A2P05997 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
COL5A2P05997 HES4-204ENST00000484667 667 ntTSL 3 BASIC34.03■■■■□ 3.04
COL5A2P05997 AL592293.1-201ENST00000502889 1188 ntBASIC34.03■■■■□ 3.04
COL5A2P05997 AC009831.1-201ENST00000580420 1582 ntBASIC34.02■■■■□ 3.04
COL5A2P05997 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
COL5A2P05997 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC34.02■■■■□ 3.04
COL5A2P05997 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC34.01■■■■□ 3.04
COL5A2P05997 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC34.01■■■■□ 3.04
COL5A2P05997 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
COL5A2P05997 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC34.01■■■■□ 3.03
COL5A2P05997 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
COL5A2P05997 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Retrieved 100 of 98,524 protein–RNA pairs in 458.9 ms