Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 MIR3648-2-201ENST00000581792 180 ntBASIC28.98■■■□□ 2.23
TDP2O95551 MIR3648-1-201ENST00000615959 180 ntBASIC28.98■■■□□ 2.23
TDP2O95551 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.98■■■□□ 2.23
TDP2O95551 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
TDP2O95551 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.96■■■□□ 2.23
TDP2O95551 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
TDP2O95551 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.96■■■□□ 2.23
TDP2O95551 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
TDP2O95551 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
TDP2O95551 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
TDP2O95551 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
TDP2O95551 AC110285.7-201ENST00000624417 1536 ntBASIC28.95■■■□□ 2.23
TDP2O95551 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
TDP2O95551 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC28.95■■■□□ 2.22
TDP2O95551 AC016575.1-201ENST00000607026 382 ntBASIC28.95■■■□□ 2.22
TDP2O95551 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
TDP2O95551 DRD5P2-201ENST00000421395 2012 ntBASIC28.94■■■□□ 2.22
TDP2O95551 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
TDP2O95551 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
TDP2O95551 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
TDP2O95551 AGPS-202ENST00000409888 815 ntTSL 4 BASIC28.94■■■□□ 2.22
TDP2O95551 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
TDP2O95551 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
TDP2O95551 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.93■■■□□ 2.22
TDP2O95551 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
TDP2O95551 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.93■■■□□ 2.22
TDP2O95551 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
TDP2O95551 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.92■■■□□ 2.22
TDP2O95551 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.92■■■□□ 2.22
TDP2O95551 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.91■■■□□ 2.22
TDP2O95551 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
TDP2O95551 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
TDP2O95551 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
TDP2O95551 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.9■■■□□ 2.22
TDP2O95551 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.9■■■□□ 2.22
TDP2O95551 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
TDP2O95551 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.89■■■□□ 2.22
TDP2O95551 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
TDP2O95551 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
TDP2O95551 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
TDP2O95551 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
TDP2O95551 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.87■■■□□ 2.21
TDP2O95551 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.87■■■□□ 2.21
TDP2O95551 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
TDP2O95551 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
TDP2O95551 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.85■■■□□ 2.21
TDP2O95551 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
TDP2O95551 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
TDP2O95551 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
TDP2O95551 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
TDP2O95551 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
TDP2O95551 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.83■■■□□ 2.21
TDP2O95551 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
TDP2O95551 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TDP2O95551 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.83■■■□□ 2.21
TDP2O95551 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TDP2O95551 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
TDP2O95551 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
TDP2O95551 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
TDP2O95551 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TDP2O95551 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TDP2O95551 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
TDP2O95551 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
TDP2O95551 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.81■■■□□ 2.2
TDP2O95551 AP002414.2-202ENST00000590929 1450 ntBASIC28.81■■■□□ 2.2
TDP2O95551 HLA-V-202ENST00000446817 847 ntBASIC28.81■■■□□ 2.2
TDP2O95551 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
TDP2O95551 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC28.81■■■□□ 2.2
TDP2O95551 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
TDP2O95551 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TDP2O95551 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.79■■■□□ 2.2
TDP2O95551 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TDP2O95551 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
TDP2O95551 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
TDP2O95551 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.78■■■□□ 2.2
TDP2O95551 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
TDP2O95551 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TDP2O95551 MIR639-201ENST00000384974 98 ntBASIC28.77■■■□□ 2.2
TDP2O95551 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
TDP2O95551 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
TDP2O95551 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TDP2O95551 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TDP2O95551 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.76■■■□□ 2.2
TDP2O95551 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TDP2O95551 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.75■■■□□ 2.19
TDP2O95551 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
TDP2O95551 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.75■■■□□ 2.19
TDP2O95551 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
TDP2O95551 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
TDP2O95551 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
TDP2O95551 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TDP2O95551 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
TDP2O95551 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
TDP2O95551 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.72■■■□□ 2.19
TDP2O95551 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
TDP2O95551 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.72■■■□□ 2.19
TDP2O95551 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.71■■■□□ 2.19
TDP2O95551 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
TDP2O95551 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
TDP2O95551 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms