Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD6O75340 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.41■■□□□ 1.02
PDCD6O75340 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD6O75340 SUZ12P1-203ENST00000578195 985 ntBASIC21.41■■□□□ 1.02
PDCD6O75340 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD6O75340 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDCD6O75340 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.4■■□□□ 1.02
PDCD6O75340 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
PDCD6O75340 AC108673.1-201ENST00000510422 1159 ntBASIC21.4■■□□□ 1.02
PDCD6O75340 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDCD6O75340 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDCD6O75340 AC135983.2-203ENST00000454486 1613 ntBASIC21.4■■□□□ 1.02
PDCD6O75340 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDCD6O75340 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.39■■□□□ 1.01
PDCD6O75340 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDCD6O75340 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PDCD6O75340 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PDCD6O75340 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD6O75340 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD6O75340 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.38■■□□□ 1.01
PDCD6O75340 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD6O75340 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD6O75340 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD6O75340 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDCD6O75340 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.37■■□□□ 1.01
PDCD6O75340 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.37■■□□□ 1.01
PDCD6O75340 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDCD6O75340 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDCD6O75340 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.36■■□□□ 1.01
PDCD6O75340 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.36■■□□□ 1.01
PDCD6O75340 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PDCD6O75340 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDCD6O75340 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDCD6O75340 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDCD6O75340 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDCD6O75340 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.35■■□□□ 1.01
PDCD6O75340 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDCD6O75340 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
PDCD6O75340 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.33■■□□□ 1.01
PDCD6O75340 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.33■■□□□ 1.01
PDCD6O75340 AC018358.1-201ENST00000631079 1402 ntBASIC21.33■■□□□ 1.01
PDCD6O75340 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.33■■□□□ 1
PDCD6O75340 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.33■■□□□ 1
PDCD6O75340 WHAMMP2-203ENST00000563942 1603 ntBASIC21.33■■□□□ 1
PDCD6O75340 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
PDCD6O75340 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDCD6O75340 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDCD6O75340 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDCD6O75340 MIR6090-201ENST00000622481 60 ntBASIC21.32■■□□□ 1
PDCD6O75340 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDCD6O75340 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDCD6O75340 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.31■■□□□ 1
PDCD6O75340 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.31■■□□□ 1
PDCD6O75340 LINC00273-201ENST00000539813 1452 ntBASIC21.31■■□□□ 1
PDCD6O75340 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.3■■□□□ 1
PDCD6O75340 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDCD6O75340 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.29■■□□□ 1
PDCD6O75340 DUX4L28-201ENST00000623687 678 ntBASIC21.29■■□□□ 1
PDCD6O75340 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDCD6O75340 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PDCD6O75340 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PDCD6O75340 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.28■■□□□ 1
PDCD6O75340 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDCD6O75340 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PDCD6O75340 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
PDCD6O75340 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDCD6O75340 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.27■■□□□ 1
PDCD6O75340 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.27■■□□□ 1
PDCD6O75340 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.27■■□□□ 1
PDCD6O75340 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDCD6O75340 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDCD6O75340 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDCD6O75340 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDCD6O75340 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD6O75340 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD6O75340 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD6O75340 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD6O75340 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD6O75340 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD6O75340 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD6O75340 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD6O75340 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.25■□□□□ 0.99
PDCD6O75340 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD6O75340 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.24■□□□□ 0.99
PDCD6O75340 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.24■□□□□ 0.99
PDCD6O75340 MIR3665-201ENST00000578708 105 ntBASIC21.24■□□□□ 0.99
PDCD6O75340 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDCD6O75340 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDCD6O75340 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PDCD6O75340 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.23■□□□□ 0.99
PDCD6O75340 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD6O75340 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PDCD6O75340 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PDCD6O75340 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD6O75340 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDCD6O75340 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDCD6O75340 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PDCD6O75340 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDCD6O75340 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PDCD6O75340 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms