Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD6O75340 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.41■■□□□ 1.02
PDCD6O75340 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD6O75340 SUZ12P1-203ENST00000578195 985 ntBASIC21.41■■□□□ 1.02
PDCD6O75340 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PDCD6O75340 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDCD6O75340 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.4■■□□□ 1.02
PDCD6O75340 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
PDCD6O75340 AC108673.1-201ENST00000510422 1159 ntBASIC21.4■■□□□ 1.02
PDCD6O75340 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDCD6O75340 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PDCD6O75340 AC135983.2-203ENST00000454486 1613 ntBASIC21.4■■□□□ 1.02
PDCD6O75340 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PDCD6O75340 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.39■■□□□ 1.01
PDCD6O75340 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PDCD6O75340 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PDCD6O75340 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PDCD6O75340 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD6O75340 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD6O75340 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.38■■□□□ 1.01
PDCD6O75340 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD6O75340 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD6O75340 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PDCD6O75340 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDCD6O75340 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.37■■□□□ 1.01
PDCD6O75340 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.37■■□□□ 1.01
PDCD6O75340 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PDCD6O75340 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PDCD6O75340 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.36■■□□□ 1.01
PDCD6O75340 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.36■■□□□ 1.01
PDCD6O75340 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PDCD6O75340 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PDCD6O75340 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDCD6O75340 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDCD6O75340 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PDCD6O75340 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.35■■□□□ 1.01
PDCD6O75340 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDCD6O75340 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
PDCD6O75340 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.33■■□□□ 1.01
PDCD6O75340 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.33■■□□□ 1.01
PDCD6O75340 AC018358.1-201ENST00000631079 1402 ntBASIC21.33■■□□□ 1.01
PDCD6O75340 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.33■■□□□ 1
PDCD6O75340 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.33■■□□□ 1
PDCD6O75340 WHAMMP2-203ENST00000563942 1603 ntBASIC21.33■■□□□ 1
PDCD6O75340 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
PDCD6O75340 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDCD6O75340 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDCD6O75340 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDCD6O75340 MIR6090-201ENST00000622481 60 ntBASIC21.32■■□□□ 1
PDCD6O75340 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDCD6O75340 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDCD6O75340 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.31■■□□□ 1
PDCD6O75340 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.31■■□□□ 1
PDCD6O75340 LINC00273-201ENST00000539813 1452 ntBASIC21.31■■□□□ 1
PDCD6O75340 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.3■■□□□ 1
PDCD6O75340 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDCD6O75340 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.29■■□□□ 1
PDCD6O75340 DUX4L28-201ENST00000623687 678 ntBASIC21.29■■□□□ 1
PDCD6O75340 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PDCD6O75340 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PDCD6O75340 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PDCD6O75340 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.28■■□□□ 1
PDCD6O75340 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PDCD6O75340 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PDCD6O75340 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
PDCD6O75340 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDCD6O75340 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.27■■□□□ 1
PDCD6O75340 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.27■■□□□ 1
PDCD6O75340 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.27■■□□□ 1
PDCD6O75340 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDCD6O75340 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PDCD6O75340 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDCD6O75340 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PDCD6O75340 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD6O75340 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD6O75340 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD6O75340 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD6O75340 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD6O75340 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDCD6O75340 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD6O75340 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD6O75340 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.25■□□□□ 0.99
PDCD6O75340 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDCD6O75340 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.24■□□□□ 0.99
PDCD6O75340 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.24■□□□□ 0.99
PDCD6O75340 MIR3665-201ENST00000578708 105 ntBASIC21.24■□□□□ 0.99
PDCD6O75340 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDCD6O75340 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDCD6O75340 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PDCD6O75340 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.23■□□□□ 0.99
PDCD6O75340 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD6O75340 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PDCD6O75340 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
PDCD6O75340 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDCD6O75340 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDCD6O75340 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDCD6O75340 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PDCD6O75340 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDCD6O75340 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PDCD6O75340 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms